Arabidopsis lyrata (lyrate rockcress): 9306846
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Entry
9306846 CDS
T01578
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNL1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
9306846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9306846
Membrane trafficking [BR:
aly04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
9306846
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
Sec7-like_HDS
Mon2_C
BpuJI_N
TPR_LAA1_C
Motif
Other DBs
NCBI-GeneID:
9306846
NCBI-ProteinID:
XP_020872915
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MGYQNHPSGSNSFHGEFKRCHSKPSKGAVASMINSEIGAVLAVMRRNVRWGVRYIADDDQ
LEHSLIHSLKELRKQIFSWQSNWQYVDPRLYIQPFLDVILSDETGAPITGVALSSVYKIL
TLEIFTLETVNVGEAMHIIVDAVKSCRFEVTDPASEEVVLMKILQVLLACVKSKASNGLS
NQDICTIVNTCLRVVHQSSSKSELLQRIARHTMHELIRCIFSQLPFISPLANESELHVHD
KVGIVDWDQNSGEKRVENGNIASVSDTLGTDKDSPSSEMVIPETELRNDEKKTEVSDDLN
ADANGENAMMAPFGIPCMVEIFHFLCTLLNVGENGEVNSRSNPIAFDEDVPLFALGLINS
AIELGGPFFRDHPKLLTLIQDELFCNLMQFGMSMSPLILSTVCSIVLNLYLNLRTELKVQ
LEAFFSYVLLRIAQSKHGSSYQQQEVAMEALVDLCRQHTFIAEMFANFDCDITYSNVFED
VSNLLSKSAFPVNGPISAMHILALDGLISMVQGMAERVGEEFPASDVPTHEERYEEFWTV
RCENYGDPNFWVPFVRKAKHIKKKLMLGADHFNRDPKKGLQYLQGMHLLPEELDPKSVAC
FFRYTCGLDKNLIGDFLGNHDQFCIQVLHEFAKTFDFQNMNLATALRLFVGTFRLPGEAQ
KIQRVLEAFSERYYEQSPHILIDKDAAFVLAYSIILLNTDQHNAQVRTRMTEEDFIRNNR
TINGGADLPREYLSEIYHSIRHSQIEIEMNPDEGTGFQLMTASRWISVIYKSKETSPYIQ
CDTASHLDRDMFYIVSGPTIAATSVVFEQTEQEDVLQRCIDGLLAIAKLSAYYHLNSVLD
DLVVSLCKFTPFFAPLSADEAVLALGEDARARMATEAVFLIANKYGDYISSGWKNILECV
LSLNKLHILPDHIASDAADDPELSTSSLEQEKPSANPLPVISQSQPSATPRKSSSFIGRF
LMSFDSEETKPLPTEEELAAYKHARGIVKDCHIDSIFSDSKFLQAESLQQLVNSLIKASG
KDEASSVFCLELLIAVTLNNRDRILLIWQTVYEHILGIVQPTLTPCTLVEKAVFGVLKIC
QRLLPYKENLTDELLKSLQLVLKLKPRVADAYCERITQEVVHLVKANASHIRSHTGWRTI
ISLLSITARHPEASDAGFEALRFIMSEGAHLLPSNYELCLDAAKNFAISRVGEIDRSISA
IDLMSNSVFCLARWSQEAKNSIGETDAMMKLSEDIGEMWLALVNKLQIVCYDQRDQVRNH
AILMLQRAIAGADGIMLPQPIWFQCFDSAVFPLLDKSLAFAIENSRKNFKKTVEETLVLA
TKLMSKAFLQSLQDISQQPSFCRLWVGVLNRLETYMSTEFRGKRSEKVHELIPELLKNTL
LVMKATGVLLPGDDIGSDSFWQLTWLHVKKISPSLQSEVFPQEELDQFQRRNAKPEDSPV
PENEA
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggggtatcagaatcatccttcgggaagtaactcgttccatggagagttcaagagatgt
cactccaaaccgtctaagggtgcggtggcatccatgattaattctgaaattggtgcagtt
ttggctgtgatgaggagaaatgtacggtggggtgttcgttatattgcagatgatgatcag
ttagagcattctcttatccattctttgaaagaattgcgtaagcagatattttcatggcaa
agcaattggcaatatgttgaccctagattgtacatacagccctttttggatgttatattg
tctgatgaaactggtgctccaattactggcgttgctttgtcatccgtttacaagatctta
actcttgagatttttacccttgaaaccgtgaatgtgggagaggcaatgcatatcatagtt
gatgctgtaaaaagctgtcgttttgaggttactgatccagcctcagaggaagtggttctg
atgaagatacttcaagttctgctggcttgcgtaaagagtaaggcgtctaatggattgagt
aatcaagacatttgcaccatcgtcaacacttgtttgcgcgttgttcatcaatcaagctcc
aaaagtgaattgttgcagcgtatagctcgccacacaatgcatgagttgattagatgtatc
ttctctcaacttccttttatcagccccttggctaatgaaagtgaattacatgtccacgat
aaggtgggaatagtggactgggatcagaattctggagaaaaaagggttgaaaatggaaat
attgctagtgtatctgatactctcggcactgacaaagattctccaagttctgagatggtt
attccagaaacagaacttcgaaatgatgaaaagaaaactgaggtcagcgatgacttgaat
gctgatgcaaatggtgaaaatgcaatgatggcgccttttggtattccatgcatggtagag
atttttcatttcttgtgtacgctgttgaatgttggagaaaacggtgaagtcaattccaga
tccaacccaatagcgtttgatgaagatgttcctcttttcgctctgggtttaattaattct
gctatagaacttggagggccttttttccgtgaccacccaaagctgttgactttgattcag
gatgagttattctgtaacttgatgcagtttggtatgtccatgagccctctgattctttct
acagtttgcagcatcgttcttaatctctacctgaatctccgtactgagcttaaggtacag
cttgaagctttcttttcatatgtacttctgaggattgcacagagcaaacatggctcttct
tatcagcaacaggaggtggctatggaggctctggttgatctttgcagacaacatactttc
atagctgaaatgtttgcaaatttcgattgtgatataacctacagtaatgtgtttgaagat
gtttcaaacctgctatcaaagagtgccttcccagttaatgggcctatatctgctatgcat
atacttgcattggatgggttaatttctatggttcagggaatggctgagagagtgggtgaa
gaatttccggcttcagatgttcctacacatgaagaaagatatgaagaattctggacagtg
agatgtgagaattacggagatcctaatttttgggttccctttgtccgaaaggcaaagcat
ataaagaaaaagttgatgcttggggctgatcattttaaccgtgatcctaaaaaaggctta
cagtatcttcaagggatgcacttgttgcccgaggaacttgatccaaagagtgtggcatgt
ttcttcaggtatacatgtgggttagataagaatcttataggagatttccttggaaatcat
gaccagttctgtattcaggtgcttcatgagtttgccaagacgtttgacttccagaacatg
aatcttgctaccgccctgcgtctctttgtcggtacatttagattgcctggcgaggcacag
aagatacagagggtgctggaggcgttttctgagagatactatgagcagtcaccacatata
ctgattgataaagatgctgcctttgtgttagcttactcgattatcttgctgaacacagat
cagcacaacgcccaggtgaggacaaggatgactgaagaagatttcatccgtaacaacagg
acaataaatggaggcgcagaccttcctagagagtacctatctgagatttatcattcaatc
cgccacagtcagattgagattgagatgaacccagatgagggaaccggcttccaactgatg
acagccagtcgttggattagtgtgatttacaaatccaaagaaaccagtccctatatccaa
tgtgacactgcatcccatctggaccgtgacatgttttatatcgtgtctggtcccactatt
gctgctacatcagtggtttttgagcaaacagagcaagaagatgttttgcagagatgtatt
gatgggttattggccattgcaaaactttcagcatattatcatttgaatagtgttttggat
gatctggttgtgtctctctgcaaattcacacccttcttcgccccattatctgctgatgaa
gctgttcttgctctaggagaagatgccagagccagaatggctactgaagctgttttcttg
attgcaaataaatatggtgactatattagttcgggctggaaaaacatattggaatgtgtc
ttgagcctcaataaactccacattttaccagatcatatagctagtgatgcagcggatgac
ccagagctgtcaactagtagcttggagcaagaaaaaccttcggcaaatcccctgccagtc
atatcacagtcacaaccctcagcgacgcctcgaaaatcatctagttttattggtcggttt
ctcatgtcttttgattctgaggagacaaagccattaccaaccgaggaagaactggcagct
tataaacatgctcgtgggatagtgaaagattgtcatattgatagcatattctcagacagc
aagtttctccaagctgagtctctgcagcagcttgttaactctcttataaaagcatccggg
aaagatgaagctagttcagtcttttgcctggagcttctaattgcagtaactctgaacaac
cgagacagaatcctactgatttggcaaactgtttatgagcatatcttgggtatagtacaa
ccaacattaacaccatgcacgcttgttgaaaaggctgtttttggtgtactgaagatttgc
cagagattattaccatacaaggaaaatctaacagatgaacttctgaaatcactccaactg
gttctcaagcttaaaccaagagtggctgatgcatactgcgaacgcattacacaagaagtt
gtccatcttgtaaaagcaaacgcatctcacattagatcccatactggttggcgaacgatc
atatctctgctatcaatcacagctcggcatccagaagcttctgatgcgggattcgaagcc
ctccggtttataatgtcagaaggagctcacttgttaccatcaaactacgagctctgtttg
gatgcagctaagaactttgctatatcccgagttggtgaaatcgatcggtccatctcagca
attgacttaatgtcaaactctgtgttttgtcttgcaagatggtctcaagaggcgaaaaac
tcgattggtgaaactgatgccatgatgaaactaagtgaagatattggagaaatgtggctc
gcacttgtgaacaagctccaaatagtatgttatgatcaacgcgaccaagtgagaaaccat
gcaattttgatgctgcaacgagctatagctggtgcagacgggatcatgttaccacaacct
atatggttccagtgctttgattccgcagtcttcccattgctagacaaatcgctcgctttt
gcgatcgagaattcaaggaagaatttcaagaaaacagttgaagaaacgcttgttctcgcc
acaaagctcatgtcaaaagcttttcttcaatctcttcaagatatctcacagcaaccgtct
ttctgcagactttgggttggtgtcttaaaccgtttggaaacttacatgtcaactgaattc
agaggaaaacgcagcgagaaagtccatgaactcatccctgaactgctcaagaacacattg
ctggtaatgaaggcgacgggagttttattaccaggtgatgatatcggaagtgacagtttc
tggcaactaacgtggcttcacgttaagaagatttctccttctctgcaatctgaagtattc
ccacaagaggagctcgatcagtttcagagacgaaacgcaaagcctgaggattctccggta
ccggaaaacgaggcctga
DBGET
integrated database retrieval system
