Arabidopsis lyrata (lyrate rockcress): 9306906
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Entry
9306906 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC9306906
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00260
Glycine, serine and threonine metabolism
aly00400
Phenylalanine, tyrosine and tryptophan biosynthesis
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01230
Biosynthesis of amino acids
Module
aly_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
9306906
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
9306906
Enzymes [BR:
aly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
9306906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
9306906
NCBI-ProteinID:
XP_020875447
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MVSQLLLPPNHFTKSVSAKVFFTGDYQGFSDLTLRRKSNQAQRVSNNGFSLRAKADLRFT
NNKSLVEIPKQWYNLVADLSVKPPPPLHPKTFQPIKPEDLSHLFPNELIKQEATQKRFID
IPEEVLEIYKLWRPTPLIRAKRLEKLLQTPARIYFKYEGGSPAGSHKPNTAVPQAYYNAK
EGVKNVVTETGAGQWGSSLAFASSLFGLDCEVWQVANSYHTKPYRRLMMQTWGAKVHPSP
SDLTEAGRRILESDPSSPGSLGIAISEAVEVAARNEDTKYCLGSVLNHVLLHQTIIGEEC
IQQMENFGETPDLIIGCTGGGSNFAGLSFPFIREKLKGNINPVIRAVEPSACPSLTKGVY
AYDFGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYEQGFMEAISIPQIE
CFQGAIQFARTEGIIPAPEPTHAIAATIREALRCRETGEAKVILMAMCGHGHFDLASYDK
YLKGELIDLSFSEEKIRESLSKVPHVV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggtctctcaattgcttttgcctccaaaccatttcaccaaatcagtctcagctaaagtt
ttcttcactggtgattatcaaggatttagtgacttaaccctgagaagaaaatctaatcaa
gcacaaagggtttcaaataatggatttagcttaagagcaaaagcagatttgagatttact
aacaacaaatcattggttgaaattccaaaacaatggtacaatcttgttgctgatctttca
gtcaagccacctccaccgttgcatccaaagactttccaaccgataaaacccgaagatttg
tctcatcttttccccaatgagttgattaaacaagaagcaacacaaaagaggtttattgat
atccctgaggaagttcttgaaatctacaagctttggcgtccaactcctctaatcagagca
aagagattagagaagcttcttcaaacaccggcaaggatttacttcaagtatgaaggtggt
agcccagctggttcacacaaacccaacacagcggttccgcaagcttattacaatgcgaaa
gaaggtgtcaagaacgttgtgacggaaaccggcgctggccaatggggcagttctttagcc
tttgcttctagtctatttggccttgattgtgaagtatggcaagtagccaactcgtaccat
acaaagccatatcgtcggttaatgatgcaaacttggggtgcaaaggttcatccatcgcca
tcggatctcactgaggcaggtagaagaatcctcgaatccgatccatcaagtccgggaagt
ttaggcattgcgatttcagaagctgttgaagttgcagcgagaaacgaggatacaaaatac
tgcctagggagtgtattgaaccatgtgttgttacatcagacaattattggagaagaatgc
attcaacaaatggagaattttggcgaaacacctgatttgatcatagggtgtactggtgga
ggatcaaattttgctggtttgagttttccttttattcgagagaaactcaaaggaaatata
aaccctgttataagagcggttgagccctccgcttgtccttccttgaccaaaggggtttac
gcgtatgattttggcgatacagctggattgactcctttgatgaagatgcatactttagga
catgacttcattcctgatcctatccatgccggtggattacggtaccatgggatggcaccc
ttgatctcacatgtttatgaacaaggattcatggaagcaatttcaattcctcaaatcgag
tgtttccaaggtgctattcagtttgcaagaacagaagggataatacccgcaccagaaccg
actcacgccattgctgcaaccataagagaagctctccgatgcagagagacaggagaagca
aaagtgatactaatggctatgtgtggacatggccacttcgaccttgcctcttacgacaag
tatttaaaaggcgagttgatagatttatcattcagcgaagagaagatacgagagtctttg
tccaaggttcctcatgttgtttaa
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integrated database retrieval system
