Arabidopsis lyrata (lyrate rockcress): 9307004
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Entry
9307004 CDS
T01578
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aly01009
]
9307004
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9307004
Enzymes [BR:
aly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
9307004
Protein phosphatases and associated proteins [BR:
aly01009
]
HAD phosphatases
Fcp/Scp phosphatases
9307004
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
9307004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Staufen_C
LPP20
Motif
Other DBs
NCBI-GeneID:
9307004
NCBI-ProteinID:
XP_020876845
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MSRLGHKSVVYHGDLRLGELDVNHVSSSHEFRFPNDEIRIHHLSPAGERCPPLAILQTIA
SFAVRCKLESSAPVKPQELMHLHAVCFHELKTAVVLLGDEEIHLVAMPSKEKKFPCFWCF
SVPSGLYDSCLRMLNTRCLSIVFDLDETLIVANTMKSFEDRIEALKSWISREMDPVRING
MSAELKRYMDDRMLLKQYIDNDYAFDNGVLLKAQPEEVRPTSDGLEKVYRPVIRLPEKNT
VLTRINPEIRDTSVLVKLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEMWRLLDPE
AHLISLKELRDRIVCVKPDAKKSLLSVFNGGICHPKMAMVIDDRIKVWEDKDQPRVHVVP
AYLPYYAPQAETALLVPILCVARNVACNVRGYFFKEFDESLMSSISLVYYEDDVENLPPS
PDVSNYVVIEDPGFASNGNINAPPMTEGMCGGEVERRLNQSAAADHSTLPATSNAEQKPE
TPKPQIAVIPNNASTATAAALLPSHKPSLLGAPRRDGLTFSDGGRPLMMRPGVDIRNQNF
NQPPILAKIPMQPPSSSMHSQGGWLVDDENRPSFPGRPSGIYPSQFPHGIPGSAPVGSFA
HPSHLRSEEVSMDDDLKRQNLSRQTTEGGLSQNHLVSNGREHHTDGGKSNGGQSHLFVSA
LQEIGRRCGSKVEYRTVISTNKELQFSVEVLFTGEKIGIGMGKTKKDAHQQAAENALRSL
AENYVAHVALLSRETEKDPENDNGFLWESSEDVSNKGLEEEAPKENISEL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttaggtcataaatccgtggtttatcacggagatttgcgtttgggggaactt
gatgtgaaccatgtatcttcaagtcatgaatttcgattcccgaacgatgagattcgaatc
caccatctatctccggctggtgagagatgtcctccgctcgcgattcttcagacgattgct
tcttttgccgttagatgcaagcttgagtcatcggctccggtcaaacctcaagagttaatg
catctacacgcagtctgtttccatgaattgaagactgcagtggttttgctcggagatgag
gagattcatttagtggcgatgccgagtaaggagaagaagttcccgtgtttttggtgtttt
tcggttccttcaggtctttatgattcatgtttaaggatgcttaatactcggtgtttgtca
attgtgtttgatctggatgagactttgattgttgcaaataccatgaagtcatttgaggat
agaatcgaggctcttaaatcctggatttcacgagagatggatcctgtgaggattaatgga
atgtcagcagaacttaaaaggtatatggatgataggatgctgctgaagcagtatattgat
aatgactatgcatttgataacggagttttgttaaaggctcaacctgaggaggtccgccca
acttcggatggactcgagaaagtttatagacccgtgattagattgcccgaaaagaatact
gtgcttactcgaattaatccagagatccgtgacactagtgtgcttgtaaaactgagacca
gcgtgggaggagttgagaagttatttgacagccaaaactaggaaacgttttgaagtttac
gtttgcaccatggctgaaagggattatgctctggaaatgtggagactacttgatcctgaa
gcacacttgattagtctcaaggagcttcgagatcgtattgtctgcgttaaaccagacgcc
aagaaatcgttgttaagtgttttcaatggtggcatatgccatccgaaaatggcaatggtc
attgatgaccgtattaaggtttgggaggacaaggatcaaccacgggttcatgttgttcct
gcatatcttccttattatgctccacaagcagagacagcccttctcgttccaattctctgc
gtagcaagaaatgttgcttgcaatgtcagaggttactttttcaaggaatttgatgagagt
ttaatgagtagtatatctttggtttactatgaagatgatgtggaaaatttacctccatca
ccagatgtgagcaactatgtcgttatagaggatcctggctttgcctcaaatggaaacata
aatgctcctccaatgaccgaaggaatgtgtgggggtgaagtggaacgcagactaaaccaa
tcggctgcagctgatcattctactcttcctgcaacaagtaacgctgagcagaaacctgaa
acccctaagccgcagatagcagttataccaaataacgcaagcacggcaactgcagcagca
ctgttaccttcgcataaacctagtttgcttggagctcctagacgggatggcctcactttt
tctgatggtggaagaccccttatgatgaggcctggtgtagatataaggaaccaaaacttt
aatcaaccgcccattctggctaaaattcctatgcagccaccttcctcttctatgcattct
cagggtggttggttggtagatgatgagaatagaccatcttttcctggtcgaccttcagga
atttatccaagtcaatttcctcatggaataccaggttctgctcctgttggttcattcgca
cacccatcccacttgaggagtgaagaggtatcaatggatgatgacctgaaaaggcaaaat
ctttcacgtcaaacaacagaaggtggattatcccagaatcatttggtgtcaaatggtaga
gaacatcatacagatggtggaaagagtaatggcgggcaatctcatttatttgtgagtgca
ctacaagaaattggaagaagatgtggttcaaaggtggagtataggactgtgataagtacc
aacaaagagttacagttttcagttgaggttttgttcacgggtgagaagataggcattggg
atgggaaaaactaagaaagatgcacatcaacaagcggccgagaatgctcttcgaagtttg
gctgaaaattatgttgcacatgtggcacttctatctagagaaacagagaaagatccagaa
aatgataatggatttttgtgggaaagcagtgaagatgtatcaaacaaaggacttgaagag
gaagcacctaaagaaaacatttcagagttgtga
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integrated database retrieval system
