Arabidopsis lyrata (lyrate rockcress): 9307231
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Entry
9307231 CDS
T01578
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1 isoform X1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
9307231
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
9307231
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
9307231
NCBI-ProteinID:
XP_020875932
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MSNDEAMLVAPPLPPPFDPTKPSTPISFPIKTLQDLKSRSYFDSFHYPFNRSSVPLRRNI
DALPDRSRLLVCHDMKGGYVDDKWVQGCGNNAGYAIWDWYLMDVFVYFSHSLVTLPPPCW
TNTAHRHGVKVLGTFITEWDEGKATCKELSATKESAQMYAERLAELAAALGFDGWLINIE
NVIDEVQIPNLMVFVSHLTKVMHSSVPGGLVIWYDSVTVDGQLAWQDQLTEKNKPFFDIC
DGIFMNYTWKENYPKASAEISGDRKYDVYMGIDVFGRGTYGGGQWTANVALDLLKSSNVS
AAIFAPGWVYETEQPPDFYTAQNKWWSLVEKSWGIVQTYPQVLPFYSDFNPGLGSHISLG
GRKLSEAPWYNISCQSLQPLLEFNEGKNSDIMQVTVEEHKYGSGREASYNGGGNVSFRGK
LKRNAHFTARLFKPQLQLSASPISISFSVKSDKRSELSILLHFSSPSHETKSLLMVPNES
INRFGDMFLPCVLTSKQTTSGWTVHETNLVLDGHTLTEISAFCSRPDDLTEETNTLEYFA
LLGHISIKSQQKTKLFPLASSWVIEAHHVKFVLGGSGSKTLSCKLEWRLKHPEEDSVFTK
YNVYAENLSSSDYRPRKVMEEPRSEKVFLGTAHVDAYYVSDLVVGSDAKGVRFVVQTCGE
DGSWQELDASPNLVVEVERLSSKLCCCGLI
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgacgaagccatgttagtggcaccaccactaccaccacctttcgatcctact
aagccatcaacacctatctccttccctatcaaaactcttcaagacctgaagtctcgctct
tacttcgattcctttcattatccctttaaccgctcctccgtacctctccgtcggaacatt
gacgccttgccggatcgatctaggctcttggtttgtcacgacatgaaaggaggttacgtt
gatgataagtgggtacaaggatgtggaaacaacgccggttacgccatctgggattggtat
ttgatggacgttttcgtttacttctcacactcgcttgtgactctgcctcctccttgttgg
accaacactgctcacagacatggcgtcaaggtattggggactttcatcacagaatgggac
gaaggaaaagctacgtgtaaagagttgtcggcgacaaaggagtctgcgcagatgtatgca
gagcgtttggctgaacttgctgctgctcttggctttgatgggtggctgataaatatagag
aatgtaatagatgaagttcaaattccaaatttgatggtttttgtaagccatctaacaaaa
gtcatgcattcatctgtacctggaggtttagttatatggtatgatagtgtcactgttgat
ggtcagcttgcttggcaagatcagttaactgagaagaataaacctttctttgatatatgc
gatggaatattcatgaactatacatggaaggagaactatcccaaagcatcagctgaaatt
tccggtgacagaaaatatgatgtctacatgggaatcgatgtttttggtcggggcacttac
ggtggtggacaatggactgcaaatgttgcccttgatttgctgaagagcagtaatgtatca
gctgcgatatttgctcctggatgggtctacgaaaccgagcaaccaccggatttttacacg
gcacaaaataaatggtggtcacttgttgagaagtcatggggtatagttcaaacatatccg
caagtcttacctttctactcagattttaatccgggcctaggttctcatatctctcttgga
ggtcggaaattatcagaagctccctggtacaacatttcatgccaaagtctgcagccactc
ctagaattcaatgaaggaaagaattcagatatcatgcaagtcactgttgaagaacacaaa
tatggtagtggtcgagaagcatcttataatggaggagggaacgtcagtttcagaggaaaa
ctaaagagaaatgcacatttcacagcaagactcttcaaacctcagcttcagctctctgct
tccccaatatcaatctccttttctgtgaagtcagataaaagatccgagttaagcattctg
ctccatttttcatctccttcacatgagacaaagtccttgcttatggtgccaaatgaatcc
atcaacagatttggtgacatgttcctaccatgtgttctcacatcaaaacagaccacatcc
ggttggacggtgcatgaaacaaaccttgttctggatgggcacacattgactgagatctct
gccttctgctccagaccagatgatctcacagaagaaacaaacacactagagtattttgca
ttgcttggacatatctccatcaagagccagcaaaaaaccaagctttttcctctggcgtca
tcatgggttatcgaggctcatcacgtaaagtttgtattgggtggttctggctccaagacc
ttaagttgtaagctagaatggagattgaagcaccctgaagaagattctgtctttacaaag
tacaatgtgtatgcagagaatctgagttcgagtgattatagaccaaggaaggttatggaa
gaaccaagaagcgagaaagtgtttcttggaacagctcatgttgatgcttattatgtctct
gatctggtcgttggatcagatgctaagggagtccgattcgtggttcaaacttgtggtgaa
gatggttcatggcaggagttggatgcttcccctaaccttgtggttgaagtagaacgtctg
agttcaaagctttgttgttgtgggttgatttga
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