KEGG   Arabidopsis lyrata (lyrate rockcress): 9307237
Entry
9307237           CDS       T01578                                 
Name
(RefSeq) small RNA degrading nuclease 2
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    9307237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aly03009]
    9307237
Ribosome biogenesis [BR:aly03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    9307237
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 DUF2536
Other DBs
NCBI-GeneID: 9307237
NCBI-ProteinID: XP_020875970
LinkDB
Position
Unknown
AA seq 464 aa
MEDVLATAEGEVLVKLVKLAQKLGLKGKHGSWKEFLDFYDKQLGSSSLSDPSKRRKDDLV
AFLTTLKKKEDLQLLARVLKLDNDVFEKCRKKSPDETTEQRLVRMTLTHDEYPLDYLFPS
NAEDWVITGLGKKKMEPTKIEMIAIDCEMVLCEDGSEALVRVAAVDRDLKVILDEFVKPN
QPVVDYRTFITGLTAQDLEKATLSVVDIQEKLLMFLSEDTILVGQSLNHDLKVLKMDHAR
VIDTSLVFKYNYDGTRRPLRLKRPSLNHLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLA
ILENGVETSVPLSKEMLEAEKSKLYLHKIPCNVPYEELNGVVSRDIPHEVKPSKKQDRHY
YSAIVVFRSPEEANQAFENIAGDLGKDSTGLSQKQVFLELSSSGPRYVLIRKMVEDDLVG
EVSAEEKNASSKKRKREKDSKETRERRRCKPLRRKKQRSYVNRR
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggaggacgtgctagccacggcagagggagaggttttagtaaagctggtgaagttagcg
caaaagctaggtttaaaaggcaaacacggatcatggaaggaatttctagatttttacgac
aaacagttaggatcttcgagcttgagtgatccttcaaagcggcgcaaagatgatttggtc
gcttttcttactacactcaagaagaaagaagatttgcagctgttggctagggttctgaaa
ctcgacaatgatgtttttgagaaatgcagaaagaaatctccggatgaaaccactgagcag
aggctagttcgaatgactcttactcatgatgagtacccattagactatttgttcccatct
aacgccgaggattgggtcataacagggcttgggaagaaaaagatggaaccgaccaagatc
gaaatgattgccattgattgtgagatggttctttgtgaagatgggagtgaagctctcgtt
agagttgctgcagttgaccgtgatttaaaggtgattcttgacgaattcgtgaaaccgaat
caaccagttgttgactataggacttttattactggacttactgctcaagatcttgaaaag
gctactctatctgtggtagatatacaggaaaaattgctgatgtttctctcagaggataca
attttggtaggtcaaagtttgaaccatgatcttaaagtattgaagatggatcatgccaga
gtaatagatacttcacttgtgtttaagtataactatgacggtacaagaaggcctttaaga
cttaaaagaccttctttgaatcatctctgcaagtgtatattgggatatgaagtgcagaaa
gaaggtgttccccacaattgtgttcatgatgcagaagctgcaatgaaacttgtacttgct
atactagagaatggagtagagacctccgttccactatctaaagagatgttggaagctgag
aagtcaaagctctacctccataaaatcccttgcaatgtcccatatgaagagttaaatgga
gttgtttccagggatatcccacatgaagttaagccgtcgaaaaaacaagatcgtcactac
tatagcgcgattgttgtttttagaagtccagaagaagcaaatcaagcatttgaaaacatt
gctggagacttgggaaaggattcgacgggtttgtcacaaaaacaggtctttctagagctg
agttcatcagggcctagatacgttctcattcgtaaaatggtcgaagatgatttggttggg
gaagtctctgcagaggagaagaatgcgagttctaagaaacggaagagagaaaaagattct
aaagagaccagagagagacgcagatgtaaaccattgcgtagaaagaaacagagaagctat
gtgaaccgaagatga

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