Arabidopsis lyrata (lyrate rockcress): 9307246
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Entry
9307246 CDS
T01578
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9307246
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
9307246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
9307246
NCBI-ProteinID:
XP_020875926
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MTNMAGTATTEFRWKSPQQPPPPQQLISDSDSDSGSDSDNHQHRHNDLSNSIFKAYLDCH
SSSSPSSIDLAKIQSFLASSSSGAVSCLICLERIKRTDPTWSCTSLCFAVFHLFCIQSWA
RQCLDLQAARAVTRPSSNPTEPEAVWNCPKCRSSYQKSKIPRRYLCYCGKEEDPPADNPW
ILPHSCGEVCERPLSNNCGHYCLLLCHPGPCASCPKLVKAKCFCGGVEDVRRCGHKQFSC
GDVCERVLDCDIHNCREICHDGECPPCRERAVYKCCCGKVKEEKDCCERVFRCEASCENM
LNCGKHVCERGCHSGECGLCPYQGKRSCPCGKRFYQGLSCDVVAPLCGGTCDKVLGCGYH
RCPERCHRGPCLETCRIVVTKSCRCGGTKKQVPCHQELACERKCQRVRDCARHACRRRCC
DGECPPCSEICGKKLRCRNHKCQSPCHQGPCAPCPIMVTISCACGETHFEVPCGTETNQK
PPRCRKLCHVTPLCRHGQNQKPHKCHYGACPPCRLLCDEEYPCGHKCKLRCHGPRPPPNR
EFILKPTKKMLNIQAESTPGSPCPRCPELVWRPCVGHHLAAERMMVCSDRTQFACDNLCG
NPLPCGNHYCSFICHALDIRSSSLDKRSESCEKCDLRCQKERTPRCQHPCPRRCHPGDCP
PCKTLVKRSCHCGAMVHAFECIYYNTMSEKDQMKVRSCRGPCHRKLPNCTHLCPEICHPG
QCPLPEKCGKKVVVRCKCLTLKKEWVCQDVQAAHMATGSDPKEVSKNQFGVGLLPCDSNC
KSKLQMAESVLKQRNVKETEEKEEPSGKNASKRRKRRERGQDIQETTRLQKLAVITKRIV
MVVMLMTMLAAVSYYGYKGLLWLSDWMNEVEEQRQKSRRYPRI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgactaacatggccggaaccgccaccaccgagttccggtggaaatcaccgcaacagcct
ccaccaccacagcaactcatttccgattcagattcagactccggatccgattcagataat
catcagcaccgtcacaatgatctatcaaactctatcttcaaagcttacctcgattgccac
tcatcttcgtctccctcctctatcgatctcgctaagatccaatcttttctcgcctcttct
tcctccggtgctgtctcgtgcctcatttgtctcgaacgcattaaacgaaccgatcctaca
tggtcctgcacttccttatgcttcgccgtctttcaccttttctgcattcaatcatgggct
cgtcagtgcttagatctacaagccgcgcgtgcagtcacgcgaccttcttcaaatccgaca
gaaccggaagcggtctggaactgtccgaaatgtagatcgtcgtatcagaaatcgaagatt
ccaaggcggtatctttgttattgcggcaaggaagaggatcctccggcggataatccatgg
atcttgcctcattcttgcggcgaggtctgcgagaggccgttgagcaacaattgtggtcac
tattgcttgctcttgtgtcatcctggaccttgtgcttcttgccccaagctagtgaaggct
aaatgcttttgtggaggtgttgaagatgttcgtcgatgtggacacaagcaattctcttgc
ggagacgtctgcgagagagtcctggattgtgatatccataactgtagagagatttgtcat
gatggcgagtgtccaccgtgcagggagcgcgctgtttacaagtgctgttgtggtaaggtg
aaggaggagaaggattgctgtgagagagtctttagatgtgaggcttcttgtgagaatatg
cttaattgtggcaaacatgtatgcgagagaggatgtcactcgggagaatgtggattgtgt
ccatatcaggggaaaaggagttgtccctgtggcaagagattctaccaaggcttgtcttgt
gatgttgtggcgcctttatgtggtggcacctgtgataaagttcttggttgtggctaccat
agatgtccagagaggtgtcaccgcggtccatgccttgagacttgcaggattgtggttact
aagtcctgcagatgcggaggaacaaaaaaacaggttccttgccatcaagagttggcgtgt
gagaggaaatgccagagagtgagagattgtgcacgtcatgcttgtagacgccggtgttgt
gatggtgaatgtccaccatgctcagagatttgtggaaaaaagctccgttgcagaaaccat
aaatgccaatctccttgtcaccaaggtccatgtgctccttgtccaataatggtaacaata
tcatgtgcttgtggtgagacacattttgaggtaccctgtggcactgaaacaaatcagaaa
cctcctcgatgccgtaagttatgtcatgtaaccccattgtgcaggcatgggcaaaaccaa
aagcctcataaatgccactatggtgcttgtcctccatgtcgactcctttgtgatgaagaa
tacccatgtgggcacaagtgcaaactaaggtgtcatggacctagacctcctcctaaccgt
gaatttatacttaaaccaactaaaaagatgttgaatattcaggctgaatctacaccgggt
tctccctgccctcgttgtccagagcttgtctggaggccctgtgtaggccaccacctggca
gcagagagaatgatggtttgctctgacagaactcaatttgcatgcgataatttatgtgga
aaccctcttccatgtgggaaccattactgttcgtttatctgtcatgccctggatataaga
agttcatcattggataaaagaagtgagtcctgtgaaaagtgtgatctccgctgtcaaaag
gagagaacaccacgatgccaacatccatgtcctcgaagatgccatcccggagattgtcca
ccttgcaaaactctagtaaagagatcatgtcactgtggcgcgatggtgcatgcattcgag
tgcatatactacaatacaatgtcggagaaggaccaaatgaaggtgcgctcatgccgtgga
ccttgtcacagaaaattgccaaactgtacccatttgtgtccggagatatgtcatcctggg
cagtgtccattgccagagaagtgtgggaaaaaggtggttgttcgttgcaagtgcctaacc
ttgaagaaggaatgggtatgccaagatgttcaagcagctcatatggccacaggttctgac
cctaaagaagtatcaaagaaccagttcggtgttggcctcctcccttgtgattccaactgt
aagagcaaactacagatggctgaatcggtgttaaaacagcgcaatgtcaaagagactgag
gagaaggaggagcctagcgggaaaaatgcatcaaagcgaaggaaaaggcgtgaacggggt
caggacattcaggagaccacaaggctgcagaaacttgctgtcatcacaaagaggatagtg
atggtcgtgatgttaatgacaatgctagctgctgtttcatactatggttataagggactc
ttgtggctttctgattggatgaatgaagtcgaagaacaaagacaaaagtctagaagatac
ccgcgaatataa
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