KEGG   Arabidopsis lyrata (lyrate rockcress): 9307399
Entry
9307399           CDS       T01578                                 
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
  KO
K13338  peroxin-1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    9307399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9307399
Membrane trafficking [BR:aly04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    9307399
SSDB
Motif
Pfam: AAA PEX-1N AAA_16 AAA_lid_3 NPHP3_N AAA_5 AAA_22 nSTAND3 RuvB_N NACHT ATPase_2 AAA_14 AAA_19 Mg_chelatase Bac_DnaA IstB_IS21 RNA_helicase AAA_7 NB-ARC AAA_18 AAA_2 DUF815 AAA_11 AAA_30 AAA_24 AAA_28 ORC-CDC6-like ATPase ResIII DEAD Zeta_toxin Sigma54_activat KTI12 FtsK_SpoIIIE MCM AAA_lid_PRS2_C
Other DBs
NCBI-GeneID: 9307399
NCBI-ProteinID: XP_002871329
UniProt: D7M1C7
LinkDB
Position
Unknown
AA seq 1122 aa
METEAVVSTVAGVDCFVSLPRQLLHALQSTSSSPLPPLLPVELRSGDRRWSVAWSGSSSS
SSAIEVARVFAETISLPDATVVQVRVLPNVPKATLVTVEPETEDDWEVLELNAELAEAAI
LSQVRILHETMKFPLWLHDRTVISFAVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLKAKK
SQEKECTNVKALLRVQDTGRSAFREADVKGFELRVALTSVAYIHPETAKKYSIESLQLIS
VSPRIPLKGTAKKDEALNIKNSGASKVAENGTSSAKKEPRQTILRLVFSDLVAKGHLMMV
ESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDRGTDTLGNHNSI
RNCSHPPSGLSTYMDVVDWSVHDKVVTALSSEGLHDEGNQVNAYQVKNKKKLECLTRLWS
LAQLDAIASVTGVDVSSLIVGRETFFHFEVRGPESYKFRDGQPSVNDRWESGKKDKNTPL
EILYVMTVSDESLLGDKFTGYDLSLDRSEKSDNVVHIEPVLEKMNLGDPIYFTSAKETHC
NKGVSPDISSLTWMGPIVSDVIKRMAVLLSPAAGMWFSKFKIPSPGHILIYGPPGSGKTI
LARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHQVLSSVIAEGLEHAPSVIILDDLD
SIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYKNFSCGIGPLAFVASVQSLEQIPQT
LSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLDLAAKCEGYDAYDLEILV
DRAVHAAIGRHLPCESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGG
VTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFIS
VKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQF
LTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLMCDFPSPPERLDILTVLSRKL
PMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYLNREDKPETGTTPIITDPLLKS
IASKTKPSVSETEKQKLYDIYSQFLDSRKSTREAKGKRATLA
NT seq 3369 nt   +upstreamnt  +downstreamnt
atggaaacagaagcggtggttagtaccgtcgccggcgtcgactgtttcgtttcactccct
cgtcaattactccacgcgcttcaatccactagctcctctcctcttcctccgcttcttcct
gtcgagctccgctccggtgaccgccgttggtcagttgcttggtccggctctagctcctcc
tcttctgcgatcgaggtcgctcgagtgtttgcggaaaccatttcgttgccggatgctaca
gttgttcaagttcgtgttcttcctaatgtacccaaggctacattagtaacagttgaacca
gagactgaagatgactgggaagttcttgagctcaatgcagaacttgccgaggcagctata
cttagtcaggtgaggatactacatgagaccatgaaattccctttgtggttgcatgaccga
actgtgataagctttgcagtggtttcaacatttccatcaaaaggggtggtacaacttgtg
ccaggaactgaagtggctgtggctccaaagaggcgtgacagaaatctcaaagcaaaaaag
agtcaggaaaaagaatgcaccaatgtcaaggctctattacgcgtacaagatactggtaga
tcagcctttcgtgaagctgatgtcaaaggatttgagctaagggtagccctcacttctgtt
gcctacattcatccagaaactgccaagaaatactctatagaatctcttcagttgatttct
gtatcccctagaatacctttgaaaggtactgcaaaaaaggatgaagccttaaatatcaaa
aacagtggagcttcaaaggtggccgagaatggtacttcaagtgcaaagaaagagccccgt
caaacaattcttcgtcttgtcttttcggatttagttgctaaaggacatctaatgatggtc
gagtctcttcgtctctatctcggagcaggcctacactcatgggtttacttaaggggatgc
aatgtgaatgaagacaaagaaattcctgctctttcactttctccttgcgtcttcaagatt
tctgaaaatgaaaaggtgctggataggggtacagatacgcttggtaatcataattctatt
agaaattgcagtcatccaccatctggcttgagcacctatatggatgttgtcgactggtct
gtgcacgataaggttgttacagctctttcatctgagggtttgcatgacgaaggaaatcaa
gttaatgcctatcaagttaagaataagaaaaagttggaatgccttactcgcctgtggtca
ttggcacagcttgatgctattgcatcagtcacaggagttgatgttagttcgttaattgta
ggaagagaaacgtttttccatttcgaagtaagagggcctgaatcgtataaattcagagac
gggcagccttctgttaatgatcgttgggaaagtgggaagaaggataaaaacactccttta
gaaattttgtacgtcatgacggtctctgacgagtctttgcttggtgataaattcactggg
tatgatcttagcctggatagaagtgagaagagcgacaatgtggtgcatattgagccagtg
cttgagaagatgaatcttggcgaccctatatattttacgtcggctaaagaaacacactgc
aataaaggtgtttccccggatatatcctccttgacgtggatgggcccaatcgtgtcggat
gttatcaagagaatggccgtgttgttgtctcctgcagctggaatgtggtttagcaagttc
aagattccatcacctggacatattctcatatatgggcctcctggttcaggaaagacaata
ttggctagagctgctgcaaagtacttcgaagaacagaaagacttgttggctcatgtgatt
ttagtatcctgttctacgcttgccttggagaaggttcaacacatccatcaagtcctttct
agtgtaatagctgagggcttggaacatgcaccatccgtcatcattttggatgatctcgat
agcattatctcatcgtcttcagatactgaaggaacacaagcttcggttggggttacgatg
cttacaaaattcctaacagatgttatagatgattatggggaatacaagaatttctcttgt
ggaattggcccacttgcattcgttgcttctgtccagtctctagagcaaattccacagaca
ttgagctcatcaggacggtttgatttccatgtacaactggctgctcctgctacctcggaa
cgtggggccatactgaagcatgagatacagaaacgccttttagactgttcagaagacata
ttgcttgacttagctgctaaatgtgaaggatatgatgcatatgacctggaaatattggtt
gatagagctgttcatgctgccattggccggcatctaccttgtgaatcaaatatatccaaa
tataatttggttaaagaagactttactcgagctatgcatgattttgtgcctgttgccatg
cgtgacatcacaaaatccgcctctgaaggtggtcgtttggggtgggaagatgtgggaggt
gtgactgatattaaaaatgctataaaagagatgattgagctgccatcaaaatttccaaaa
atctttgcaaaatctcctctgcgtttgagatcgaatgttctcttgtatggcccacccggt
tgtgggaagactcacattgttggtgcagctgctgcagcgtgttccctacggtttatatca
gtgaaggggcctgagctgttaaacaaatacattggtgcatctgaacaagcggtccgtgat
atattttcaaaagcagcagctgcagcaccatgcatactctttttcgatgaattcgattca
attgctcccaagagaggacatgataatactggtgtaactgatcgagttgttaatcaattt
ttgacagaactggatggagttgaagttctaaccggtgtctttgtatttgctgcaaccagt
agaccagatctacttgatcctgcactcctaaggcctggccggcttgatcgtcttcttatg
tgcgactttccttccccaccagaacgattagatattcttactgttctttctagaaagctt
ccaatggctgatgatattgacttagagcctatagctttgatgactgaaggcttcagtgga
gctgatcttcaagctcttctctcagatgcgcaacttgcagctgtacacgagtatctgaac
agagaagataaacctgagaccggaactacgccaataataaccgatcctcttttgaagtcg
atcgcttctaaaactaaaccatcagtttccgaaaccgagaaacaaaagctctatgacata
tatagccagtttctggattcaagaaaatcgacaagagaagcaaagggcaaaagggcaacc
ttagcataa

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