Arabidopsis lyrata (lyrate rockcress): 9307410
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Entry
9307410 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome biogenesis protein 1
KO
K13338
peroxin-1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
9307410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9307410
Membrane trafficking [BR:
aly04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
9307410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
AAA_5
IstB_IS21
AAA_lid_PRS2_C
DUF815
AAA_14
DUF7320
RuvB_N
AAA_2
MCM
AAA_7
Motif
Other DBs
NCBI-GeneID:
9307410
NCBI-ProteinID:
XP_020879426
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MYVYIVSLFVTSQNEASNQTKKISLGNRTCFAIGQIILSDVMETEAVVSTIAGVDCFISL
PRQLLHALQSTSSSPLXPLLPVELRSGDRRWSVAWSGSSSSSSAIEVARVFAESISLQVK
VRVKVRVLPNVPKATLVTVEPETEDDWEVLELNAELAEAAILSQVRILHETMKFPLWLHD
RTVIRFAVVSTFPSKGVGKTIFNPILVSCSTLALEKVQHIHQVLSSVIAEGLEHAPSVII
LDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYKNNSCGIGPLAFVASVQSLE
QIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLDLAAKCEGYDAYD
LEILVDRAVHAAIGRHLPCESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGW
EDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACS
LRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDR
VVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLMCDFPSPPERLEILTV
LSRKLPMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYLNREDKPETGTTPIITD
PLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKSSREAKGKRATLA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtatacatcgtttctctttttgttacatcccaaaacgaggctagcaatcagaca
aaaaagataagcttaggaaatcgtacctgtttcgcaatcggccaaatcatcctctccgac
gtgatggaaacagaagcggtggttagtaccatcgccggcgtcgactgtttcatttcactc
cctcgtcaattactacacgcgcttcaatccactagctcctctcctcttnctccgcttctc
cctgtcgagctccgctccggtgaccgccgttggtcagttgcttggtccggctctagttcc
tcctcttctgcgatcgaggtcgctcgagtgtttgcggaaagcatttcgttacaggttaaa
gttcgtgttaaagttcgtgttcttcctaatgtgcccaaggctactttagtaacagtcgaa
ccagagactgaagatgactgggaagttcttgagctcaatgcagaacttgccgaggcagct
atacttagtcaggtgaggatactacatgagaccatgaaattccctttgtggttgcatgac
cgaactgtgataaggtttgcagtggtttcaacatttccatcaaaaggggtgggtaagacc
atctttaatccgattttagtatcctgttctacgcttgccttggagaaggttcaacacatc
catcaagtcctttctagtgtaatagctgagggcttggaacatgcaccatccgtcatcatt
ttggatgatctcgatagcattatctcatcgtcttcagataccgaaggaacacaagcttcg
gttggggttacgatgcttacaaaattcctaacagatgttatagatgattatggggaatac
aagaataactcttgtggaattggcccacttgcattcgttgcttctgtccagtctctagag
caaattccacagacattgagctcatcaggacggtttgatttccatgtgcaactggctgct
cctgctacctcggaacgtggggccatactgaagcatgagatacagaaacgccttttagac
tgttcagaagacatattgcttgacttagctgctaaatgtgaaggatatgatgcatatgac
ctggaaatattggttgatagagctgttcatgctgccattggccggcatctaccttgtgaa
tcaaatatatccaaatataatttggtcaaagaagactttactcgagctatgcatgatttt
gtgcctgttgccatgcgtgacatcacaaaatccgcctctgaaggtggtcgtttggggtgg
gaagatgtgggaggtgtgactgatattaaaaatgctatcaaagagatgattgagctgcca
tcaaaatttccaaaaatctttgcaaaatctcctttgcgtttgagatcgaatgttctcttg
tatggcccacccggttgtgggaagactcacattgttggtgcagctgctgcagcgtgttcc
ctacggtttatatcagtgaaggggcctgagttgttaaacaaatacattggtgcatctgaa
caagcggtccgtgatatattttcaaaagcagcagctgcagcaccatgcatactctttttc
gatgaattcgattcaattgctcccaagagaggacatgataataccggtgtaactgatcga
gttgttaatcaatttttgacagaactggatggagttgaagttctaaccggtgtctttgta
tttgctgcaaccagtagaccagatctacttgatcctgcactcctaaggcctggccggctt
gatcgtcttcttatgtgcgactttccttccccaccagaacgattagagattcttacagtt
ctttctagaaagcttccaatggctgatgatattgacttagagcctatagctttgatgact
gaaggcttcagtggagctgatcttcaagctcttctctcagatgcgcaacttgcagctgta
cacgagtatctgaacagagaagataaacctgagactggaactacgccaataataaccgat
cctcttttgaagtcgatcgcttctaaaactaaaccatcagtctccgaaaccgagaaacaa
aagctctatgacatatatagccagtttctggattcaagaaaatcgtcaagagaagcaaag
ggcaaaagggcaaccttagcataa
DBGET
integrated database retrieval system
