Arabidopsis lyrata (lyrate rockcress): 9307420
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Entry
9307420 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein C57A7.06
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9307420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9307420
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
9307420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
9307420
NCBI-ProteinID:
XP_020877931
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MGGEKRKSSLKNLANAKKRKGPHLPSSILKTIANEKRPLNSDEGDDEIDSDYGDDLYEYE
EGVPEEESRKNKRYDRVDNYEFELPQDFEDENVESEDDDDDRHTRMLKDVTGLPTAAFQG
DSKSKRVLITEPYPESEFNPTRDVLEGKSLTTIDDLMEPLQGLPGYSQLRDMIFRMRKDT
QSLVHAPLTKQEREKLERNVVKELVDKVFNNWVPLVKRNREAPTVYFNQDVNVGYSTVGA
IASQFQPRTGFEMKMASLLDDNEIWEAHKEDGARLLEFNEVSMEDHIKRRNHLAKMRSML
FRVDLKSKRIKKIKSKTYHRLKNKDLNKSGVGAFMDPEMAKEEAKMQEVRRVKERMTLKH
KNAGPWAKRMLRLGLNRKYDGTRAAIAEQLQINATLSRKMNSTKDESSSDEEELNDGSDQ
DTCKLIAEAKEKTLRTLEDDEVPISGLMSLPFMARAVKKKNEEANEEDKRGLEDYEEFKN
SGGAETSKKSTNVGGRRVFGAEAPKESKKESDNFFNNSDSSDNDMDDNDLEAVKDNASPA
RNTKAIMETEVPSPVSHNGCFFSPFQNLXLQHLLFDLLQKETKDEESDYDSESEAEEMVD
GILTCCSKETYEIPCQAELVRRAFAGDDVVGEFDKDKQEVLNQEVPEPEKPVQVPGWGQW
TNTQNKRGLPSRMVREHEDAKKTREQALKKRKDGSLRHVILSEKVDKKAEKLQTTSLPYP
YTSKEVFEHSMRMPIGPEFNPTTIVGDLNRPEVVKKAGMIIKPVKFEEVDPNEKVEDEHA
RSHQKQKPKKGRTLNQ
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagagaagaggaaatctagtctcaaaaacctagctaatgcaaagaagaggaaa
ggacctcacttacctagctcaatactcaagaccattgcgaatgagaaacgccctttgaac
tctgacgaaggagacgatgagatcgattccgactacggtgatgatttgtacgagtacgaa
gaaggtgtgcctgaagaggagtcaaggaaaaacaaacgctacgaccgcgtggataactat
gaattcgagcttccccaggatttcgaggatgaaaacgtggagtcagaagatgatgatgat
gataggcacacacggatgttgaaagatgtcactggattgccaactgcagcctttcaagga
gacagtaagagcaaacgtgtactcataactgaaccatatccagagtctgaattcaatcct
acccgtgatgttctggagggtaaatccctcaccacaattgatgaccttatggagcctctt
caaggattacctggatatagccaactacgcgatatgatcttccggatgcgaaaagatact
cagtctcttgttcatgctcctctgacaaagcaagaacgagaaaaactggaacggaacgta
gtgaaagaactagttgacaaggtatttaataattgggtgcctcttgtaaagaggaataga
gaggcgccaactgtttactttaaccaagatgtcaatgttggatactctaccgttggtgct
atagcatcacagtttcagcccaggactggatttgagatgaaaatggcgtctctactcgat
gataatgagatttgggaggctcacaaagaagatggagctaggcttcttgaattcaacgag
gtatctatggaagatcacatcaagagacgtaaccatcttgctaagatgcgtagcatgctc
ttccgagttgacctgaaaagtaaacgaatcaagaagattaagtctaaaacttatcatcgc
cttaaaaacaaagacctgaataaatcgggagttggagcattcatggacccagaaatggct
aaagaagaggctaagatgcaggaggttagacgagtaaaggaacgtatgactttaaagcac
aaaaacgcaggaccatgggccaaacgcatgctaaggcttggactgaataggaagtacgat
ggaactcgggcagctatagctgaacaacttcagattaatgctacattgtccagaaagatg
aactccacaaaagatgaaagcagtagtgatgaggaagagttgaatgatggttcagatcag
gatacttgtaaactgatagcggaagcaaaggagaagacactgagaactctggaagatgat
gaagtccccatttctggtctcatgtcattacctttcatggctcgtgctgtgaaaaagaaa
aatgaggaagctaatgaagaagataaacgtggacttgaggattatgaagagtttaagaac
tctggtggagcagaaacctctaaaaagtccactaatgttggtggtagaagagtatttggg
gcagaagctccaaaagagtctaaaaaggaatcagacaacttttttaataacagtgatagt
agtgacaatgatatggatgataatgacttagaggctgtaaaagataatgcttcaccagct
agaaacactaaagccattatggaaaccgaggtaccttctccggttagtcataatggttgt
ttcttctctccctttcaaaatctctgattacaacatctgttgtttgatctcctgcagaag
gagacgaaagatgaagaaagtgattatgattcagagagtgaagcagaggaaatggttgat
gggattttgacatgttgttcaaaggaaacctatgaaattccttgtcaggcagagcttgta
aggcgtgcttttgctggtgatgacgttgtaggtgaatttgacaaggataagcaagaggta
ctaaatcaggaagttcctgaacccgaaaaaccagttcaagttcctggttggggacaatgg
accaatacccaaaacaagagaggtttaccatcaaggatggttagagaacacgaagatgcc
aagaaaacgagagagcaagctctcaaaaaaaggaaagacggttctctcagacatgttatc
ctatcagaaaaagtcgataaaaaggctgagaaacttcaaacaacgagtctaccttaccct
tacacatcaaaggaagtttttgaacatagtatgcgtatgcctattggacctgagtttaat
cccacaactatagttggagatctaaaccgacctgaggttgtgaagaaagctggaatgatc
attaaacctgtcaagtttgaggaagtagatccgaatgagaaagtagaggacgaacacgct
cgtagccatcagaaacaaaaacccaaaaagggtcgtacgttaaaccaatag
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