Arabidopsis lyrata (lyrate rockcress): 9307439
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Entry
9307439 CDS
T01578
Name
(RefSeq) calmodulin-binding transcription activator 1 isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9307439
Transcription factors [BR:
aly03000
]
Eukaryotic type
Other transcription factors
Others
9307439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CG-1
Ank_2
IQ
Ank
Ank_4
Ank_3
TIG
Motif
Other DBs
NCBI-GeneID:
9307439
NCBI-ProteinID:
XP_020878488
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MVDRGSFGFISPPQLDMEQLLSEAQHRWLRPAEICEILQNYHKFHIASESPTRPASGSLF
LFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEGNENFQRRCYW
MLEQDLMHIVFVHYLEVKGNRTSIGMKENNSNSVNGTASVNIDSTASPTSTLSSLCEDAD
TGDSHQASSVLRASSEPQTGTSQIREKQDVSILNSYYQSSALVLTSLSGLLSAFLLRRPL
FSCLGNRYGWTPAPGMRNVSQVHGNRVRESDSQRLVDVRAWDAIGNSVTRYHDQPYCNNL
LTQMQPSNTDSMLVEENTDKGGRLKAEHIRNPLQTQLNWQIPVQDDLPLPKGHMDLFSHP
GMADDTDLALFEQNAQYNFETFSSLLGSENQQPFGISYQAPPSSMESEFIPVKKSLLRSE
ESLKKVDSFSRWASKELGEMEDLQMQSSRGDIAWTTVECETAAAGISLSPSLSEDQRFTI
VDFWPKCAQTDAEVEVMVIGTFLLSPQEVTKYNWSCMFGEVEVPAEILVDGVLCCHAPPH
TAGHVPFYVTCSNRFACSEVREFDFLSGSTQKIDATDVYGTYTNEASLQLRFEKMLAHRN
FVHEHHIFKGVGEKRRKISKIMSLKEEKEYLLPGTYQRDSTKQEPKEQLFREQSEEELYI
WLIHKVTEEGKGPNILDEDGQGILHFVAALGYDWAIKPMLAAGVNINFRDANGWSALHWA
AFSGREETVAVLVSLGADAGALTDPSPELPLGKTAADLAYANGHRGISGFLAESSLTSYL
EKLTVDSKENSPANSSGAKAVQTVSERTAAPMSYGDVPEKLSLKDSLTAVRNATQAADRL
HQVFRMQSFQRKQLSDIGDDDKIDISDKLAVSFATLKTKNLGQGDVSLSSAATHIQKKYR
GWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRTVIWSVGLLEKIILRWRRKGNGLRGFKR
NAVAKTVEPEPPVSAICPTIPQEDEYDYLKEGRKQTEERLEKALTRVKSMVQYPEARDQY
RRLLTVVEGFRENEASSSASINNKEEDEVNCEEDEFIDIDSLLNDDTLMMSISP
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcgcggatcttttggctttattagtcctcctcaattagatatggaacagttg
ctgtcagaagctcaacacaggtggcttaggcctgctgagatttgtgaaattcttcagaac
tatcacaagtttcatatagcatcagagtctcccacccgacccgccagtgggtcactcttt
ctttttgataggaaggtgctgagatattttaggaaagacggacataactggaggaagaag
aaggatggcaaaaccgtaaaagaagctcatgagaagctcaaggtaggaagcgtagatgtg
ctacattgttactatgcacatggggaaggcaacgagaattttcagagacgttgctactgg
atgcttgaacaagatttgatgcatatcgttttcgtacactacttggaggttaagggcaac
cggaccagtataggaatgaaagaaaacaattcaaattctgtaaatggcacagcttcagtg
aatattgattcaacggcaagcccaactagcacattgtcatcattatgtgaagatgctgat
accggggatagtcatcaagcaagttccgtcttacgagcatcttctgaacctcaaactggt
acttctcaaataagagagaagcaggatgttagcatattaaattcttactatcagagctct
gctttggtactcacctctctttctggtttactgtctgcatttttgttaagaaggcctttg
ttttcctgtttaggaaatcgctatggttggacaccagctcctggcatgcgtaatgtttca
caggttcatgggaacagagtcagagaaagtgattcccagagattagttgatgttcgagct
tgggatgccattgggaattcagtgacgagataccatgatcaaccttattgtaataatttg
ttgactcagatgcagccttctaatactgactcaatgcttgtggaagaaaatacagacaaa
ggtgggcggttaaaggcagagcatatcagaaatcctcttcaaactcaattaaattggcag
attccagttcaggatgacctaccattaccaaaagggcacatggatctgttttcacatcct
ggaatggctgatgacactgatctggcgttatttgagcaaaatgcacaatataattttgag
acattttccagtctccttggcagtgaaaatcagcaaccttttggaattagttatcaagct
cctccttcaagtatggaatctgaatttatacctgtaaagaaatcattgttaagaagcgaa
gagagtttgaaaaaagtcgatagtttttctcggtgggctagtaaagaacttggcgagatg
gaggatttgcagatgcagtcttcacgtggagatattgcatggaccactgttgaatgtgaa
actgcagcagccgggatctccttgagcccttctctctctgaggatcagcgtttcaccata
gttgatttttggccaaaatgcgcacagactgacgcagaagttgaggtcatggttattggg
acatttctgcttagtccgcaagaagtaacaaaatataactggtcatgcatgtttggtgaa
gtggaggttcctgctgagattttagtagacggcgttctttgctgtcatgctccaccgcat
acagctggtcacgtgcccttttatgttacatgttccaacagatttgcttgcagtgaagta
cgagaatttgatttcctttctggttctacacaaaaaattgatgctactgatgtttatggt
acctatacaaatgaagcatcacttcagttgcggtttgagaagatgcttgctcacagaaat
tttgttcacgaacatcatatatttaaaggtgttggggagaaacgaagaaaaatcagtaaa
attatgtcactaaaggaggagaaagagtatctccttccagggacatatcagagagattca
accaaacaagaaccaaaagaacagcttttcagggaacagtctgaagaagaactatatata
tggctcatccataaagtgactgaagagggcaaaggtccaaacatactggatgaagatgga
cagggtattttacactttgttgcagcgcttgggtatgactgggccattaaaccgatgcta
gcagcgggagttaacattaacttccgtgatgccaatggctggtctgcccttcattgggct
gcgtttagtggcagggaggaaactgtcgctgtgcttgtctctctaggtgctgatgctggg
gcattgacggatccatctccagagcttccattgggtaaaacagcagctgatttggcttac
gcaaatggacacaggggaatttcgggttttcttgcagagtcttccttaactagttatctt
gaaaagctaacagtggactcaaaggaaaatagccctgccaactcttctggagcaaaagct
gttcaaacagtctctgagcgaaccgctgctcctatgagctatggcgatgtaccagaaaaa
ctttccttaaaggattcacttaccgctgttcgtaatgctacacaagcggctgatcgtctc
catcaagtattcaggatgcaatcattccagcggaaacagctgtctgatatcggcgatgat
gacaagattgatatctctgataagttagctgtttcttttgcaactttgaaaactaagaat
ctaggacagggtgatgtttctcttagttctgctgccacccatatccagaagaaatatcgt
ggttggaagaagaggaaagagtttcttttaatccgacaaagaatcgttaaaattcaggct
catgtgagaggacatcaggtccggaaacaataccgaacagtcatctggtctgtgggatta
ctcgaaaaaatcattttgcgttggagacgcaaaggtaatggcttgagagggtttaagcgc
aatgcagtcgccaaaaccgtggaaccggaaccgcctgtatcagctatatgtcccacaatc
ccacaggaagatgagtatgattatcttaaagagggaagaaaacaaacagaggaaaggctt
gagaaggctctgactcgggtgaagtcaatggttcaatacccagaagcacgggatcaatac
cgtagactcctaacggttgtcgagggcttccgtgaaaatgaggcttcatcaagtgcatct
ataaacaataaagaagaagatgaagtcaactgtgaagaagacgagtttattgacattgac
tctcttttgaacgatgacacattgatgatgtctatttctccttga
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integrated database retrieval system
