Arabidopsis lyrata (lyrate rockcress): 9307445
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Entry
9307445 CDS
T01578
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9307445
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
9307445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_GLD-3_3rd
Pox_A28
Motif
Other DBs
NCBI-GeneID:
9307445
NCBI-ProteinID:
XP_020876546
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MEGKKFGAQSTARVPRQSPPEGYVLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVE
KAPLDSLYRVITIIADVGSTSRVKLGVIVNNASNRKKEEVQEQEVEVSRAQGALIRVFEA
LNVRFGTSSTVSSRLLMEACHVVTVIGKGGELMEMIRKETGCNVEICQYNLPSCADPDDV
MVKIEGNVFAVKKVLVSISSRLQACQSIFKKKMVGNPHNMQTNVVPREALYRASNVFQGD
ISVSRLKHRELDPLESLHRNLSQPRKDSEDNKQQVVLKILCSKERIGRVIGNGRATIRDL
QSETGAFITLGSNRLDCDEGLFTITASEDPNAKNSPSQRALVLVFSKMYENTTAKVLDSG
LTSSITARLVVRSNQINCLMGEEGHIKSTIQQRTGAFITVLNVEQNPKCVSENNQIVQIS
GAFPNVKEAINQVTSMLREDLINQSFQMGSHFPVNYFNPCIRPEDSFPNWFSPTTGYAPN
FGQVSFPLWASPPPAAPRNVNDGSGGLSSTRDRNKIVQYRVSEHDVSSVFGYGKDGHNRL
QKSLREISGAFVSLLEPYPGRMMDMTICISGTPDQIQAAENRLHAFFPQIKQGG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaagaagttcggagcgcaatctaccgctcgtgtgccgcggcagtcgccaccg
gaaggatacgtactgtttcgcattctcggccacgtgtctcaggtgggcgatgtgatcgga
aaagatggaagagtgattaggcagcttaaagaatcaacgaattcccaaatctgggtcgag
aaggctcctcttgattctctgtaccgtgtcatcacgataatcgctgatgtaggctcgacg
tctagggtaaaattaggtgttattgttaataatgctagcaacaggaagaaggaggaggtg
caagaacaagaagttgaagtctccagagcacaaggagcgttgattagggttttcgaagct
ctaaatgtcagatttgggactagtagtaccgtctcgtctaggctgttaatggaagcttgc
catgtggttactgtcataggtaagggaggtgaattgatggagatgataaggaaggaaact
ggttgtaatgttgaaatatgccaatataatttaccaagttgcgcagatcctgatgacgtg
atggtgaagatagaaggaaacgtttttgcagtgaagaaagttctagtatccatatccagt
cgtctgcaagcttgtcagtcgatttttaagaaaaagatggtagggaatcctcacaatatg
cagactaacgtggttccacgggaagcattatacagggcttctaatgttttccagggagat
atttcagtttcacgactgaagcatagagaactggatcctcttgaatccttgcatagaaat
ctttctcagccaaggaaagattctgaagataataagcaacaagtggttctgaagatactt
tgttcgaaagaaagaattggtcgtgttattgggaatgggcgtgccactatcagggatctt
caaagtgagacaggtgcctttataaccttgggaagtaatcgtcttgactgtgatgaaggc
ttatttacaattactgcatcagaggaccctaatgccaaaaactccccatcccagagagct
ttagttcttgttttctctaaaatgtatgagaataccactgcaaaagtcctagacagtggc
ttaacgtcatctatcactgcacggcttgtggtccgctcaaatcagattaattgtttgatg
ggagaagaggggcatataaaatctacaatacagcaaagaactggtgcttttataactgta
ttgaacgttgagcagaacccaaaatgtgtttcagagaacaatcaaattgtgcagatttca
ggagcgttcccaaatgtgaaagaagctataaaccaagttaccagtatgctacgagaggat
cttatcaaccaatccttccaaatggggtctcattttccagttaactatttcaatccttgc
ataagaccagaagattcatttcctaattggttcagtcctactactggatatgctccaaat
tttggtcaagtttcatttccgttgtgggcgtcaccgccacctgctgctccaagaaatgta
aatgatggaagtggaggattatcttctacaagagatagaaacaaaattgtgcaatataga
gtttcagaacatgatgtgagctctgtgtttggatatggaaaggatggtcacaatcgtcta
cagaagagtctgagagagatatcgggtgcgtttgtgtcactccttgaaccttatccagga
agaatgatggatatgaccatttgcatatctgggacacctgatcaaatccaagcagcagaa
aaccgtcttcacgccttttttcctcagataaagcagggtggataa
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