Arabidopsis lyrata (lyrate rockcress): 9307461
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Entry
9307461 CDS
T01578
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9307461
Spliceosome [BR:
aly03041
]
Common components
Common spliceosomal components
General mRNP proteins
9307461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
9307461
NCBI-ProteinID:
XP_002873428
UniProt:
D7M284
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MEFDEYEYLEKTVEEGDGSNKNKESSGNEKSERSYRKREGGERHDEEGGDEERGSSRSKK
SRGDGEENGKRERHRSSRDKDRERDKVREGSRDKESDRERSSKERDRSDRDKTRDRERRE
RERRSSSRSRREEREREVVERGSRRHKDKKDEPEADPERDQRTVFAYQMPLKATERDVYE
FFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPFLGQPVMVKPSEAE
KNLAQSNTTPGGTGPVDRKLYVGNLHFNMTELQLRQIFEAFGPVELVQLPLDPETGQCKG
FGFIQFAQLEHSKAAQISLNGKLEIAGRTIKVSSVSDHIGTQDAAPKSADFDDDDGGGLA
LNAQSRALLMQKLDRSGIATSIVGSLGVPGLNGAAFNQPGMNPSFPTPVLPTTAIPSFVN
EPVGQPSECLLLKNMFDPATETERDFDFEIREDVADECSKYGEVNHIYVDKNSAGFVYLR
FQSVEAAVAAQRAMHMRWFAQKMISATFMPPHEYEAKAKA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgacgaatacgagtaccttgagaagacggtggaggaaggagatgggtcgaat
aagaacaaggaatcgagtgggaacgagaagagcgagaggagttacagaaagagagaagga
ggagagaggcatgacgaagaaggcggtgacgaagagcgaggtagcagtcggagcaagaag
tctcgcggagacggtgaagagaacggtaagagagagaggcataggagcagcagagataag
gatcgagagagggataaggttagagaaggatcgagagataaagagagcgatcgggagagg
agtagcaaggagagagataggagcgatagggacaaaacccgagacagagagagaagagag
agggagaggaggagcagcagtagatctcggagggaggagagggaacgtgaagtagtggag
agaggaagcaggagacacaaggacaagaaagatgagcctgaagcagatccagagagagat
caaagaaccgtttttgcatatcagatgcctcttaaagctaccgagagagatgtttatgag
ttcttctccaaagcgggcaaggtgagggacgtgcgattgatcatggacagaaattcaaga
cgatcaaagggagtcgggtatattgagttttatgatgtgatgtcagttccaatggccata
gctctgtctggacaaccgtttcttggacaacctgtgatggttaagccctctgaagctgaa
aagaatttggctcaatctaacactacaccaggtggtactggccctgtagataggaaactt
tatgtgggaaatttgcatttcaacatgacagaattacagcttagacagatttttgaggca
tttggtcccgttgagcttgttcagctaccacttgatcctgagactgggcagtgcaaaggt
tttggatttattcagtttgctcaacttgaacattcaaaggcagcacaaatttccttaaat
gggaagctggagattgctggtaggacaatcaaggtttcctctgtctctgatcatattggt
acacaagatgctgctccaaaatctgctgattttgatgatgatgatggaggtggactggct
ttaaatgcacaatctagggctctgcttatgcagaagctggatcgttcaggtatcgcgacg
agcattgtggggtctcttggagtaccagggctaaatggagcagcctttaatcaaccaggc
atgaatcctagtttcccaacaccagtgcttccgacaacagcaatcccttcttttgtcaat
gaacctgttggtcagccaagtgaatgcctcctattgaagaacatgttcgatcctgcaacc
gagacggaacgagactttgactttgaaattagagaagacgttgcggatgaatgttcaaag
tatggcgaagtcaatcatatatacgtagacaagaacagtgcggggtttgtgtatctgagg
tttcaatcagtggaggcggcagtagcagctcaaagagcaatgcacatgagatggtttgca
caaaagatgatatctgcaactttcatgcctcctcatgaatatgaagccaaagccaaggcc
tga
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