Arabidopsis lyrata (lyrate rockcress): 9307573
Help
Entry
9307573 CDS
T01578
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00300
Lysine biosynthesis
aly00470
D-Amino acid metabolism
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01230
Biosynthesis of amino acids
Module
aly_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
9307573
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
9307573
Enzymes [BR:
aly01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
9307573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
9307573
NCBI-ProteinID:
XP_020878335
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MAAATQFLSQPSSIRGTLNQYQLNQTSLSRIPILSLKSTLKPLKRLSVKSAVSQNSQNST
KTLTKESASSFDHCFKKSSDGFLYCEGTKVQDIMESVERRPFYLYSKPQITRNLEAYKEA
LEGVRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKL
LEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKN
SKFGIRNEKLQWFLDEVKAHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQ
GFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCF
VNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPEAEVSKFDVVGPVCE
SADFLGKDRELPTPPQGACLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSITKIRHAE
TFDDHLRFFEGL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagctactcaatttctctcccaaccttcatctatccgcggaaccctaaatcaa
taccaattgaaccaaacctcactctcaagaatcccaattttgtctctcaagtccacattg
aagccacttaaacgcctctccgtcaaatccgccgtatcccaaaactcccaaaactccacc
aaaaccctcacgaaggaatctgcttcctctttcgaccactgtttcaagaaatcatcagat
gggtttctctattgcgaaggaactaaggttcaagatatcatggagtcagtcgagagaaga
cccttttacttatatagcaaacctcagatcacgagaaaccttgaggcgtataaagaggct
ttggaaggagtgagatctgttattggttacgctattaaagctaataacaatcttaagatt
ttggagcatttgaggagtttgggctgtggtgctgtgttggttagtggaaatgagcttagg
cttgctcttcgtgctggtttcgatcccacaaagtgcattttcaatggaaatgggaagttg
ttggaagatttagttctagctgctcaagaaggtgttttcgtaaatgttgatagtgagttt
gacttgaataacattgtggaagcttcaagaatttctggtaagcaggtcaatgtactgctg
cgtatcaatcctgatgtcgatcctcaggtgcatccatatgtagctactgggaacaagaac
tcgaagtttggtattagaaatgagaaacttcaatggtttctggatgaagtgaaggcacat
cccaaagagctgaagcttgttggagctcattgccatcttggctctaccattacaaaggtg
gatatattcagagatgctgcggttctcatgattgaatacattgatgaaatccggcgtcaa
ggctttgaggttagctacttgaacattggtggtggtttagggatagattattatcatgct
ggcgctgtccttcctacacccatggatctcatcaacaccgtaagagagcttgttctttcg
cgagacctgaatctaataatcgagccagggagatcgctgattgcaaacacatgttgtttc
gtcaaccatgtaactggtgtgaagacaaatggaactaaaaacttcatagtgattgatgga
agtatggctgagcttatccgtcccagtctttatgatgcctatcagcatattgagttggtc
tctcctacaccgcctgaagcagaggtttccaaattcgacgtagtgggtcctgtttgtgaa
tctgctgatttcttgggaaaagacagagagcttcctactcctccgcagggagcttgtttg
gtggttcatgacgctggtgcatactgtatgagtatggcttccacttacaatctcaagatg
cgacctccggaatactgggttgaagaagatgggtcgatcaccaagatcaggcatgctgag
acttttgacgaccatttgcgtttctttgaaggtctatga
DBGET
integrated database retrieval system
