KEGG   Arabidopsis lyrata (lyrate rockcress): 9307659
Entry
9307659           CDS       T01578                                 
Name
(RefSeq) protein FIZZY-RELATED 3
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    9307659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9307659
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     9307659
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_RIG_1st NBCH_WD40 Tricorn_2nd Beta-prop_SPT8 MIOS_WD40 Aldo_ket_red
Other DBs
NCBI-GeneID: 9307659
NCBI-ProteinID: XP_020879434
LinkDB
Position
Unknown
AA seq 481 aa
MASPQSTKTGLNLPAGMNQTSLRLETFSSSFRGISSLSSPSKSTCSDRFIPCRSSSRLHA
FDLQDKEPTTPVKEGGNEAYSRLLKSELFGSDFASPCLSPAGRQGSASSPMSPCTNMLRF
KTDRSNSSPSSPFSPSILGNDNGLSSDSSPPPKPPRKVPKTPHKVLDAPSLQDDFYLNVV
DWSSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQ
VWDGIQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHDIRVQSDYVSKLVGHKSE
VCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGG
GTADRCIRFWNTTNGHQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSK
VATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVKMQTPVKDTGLWSLGRTQI
R
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggcatcgccacagagtaccaaaaccggcttgaatctacccgcagggatgaaccagact
tcgttgcgcctggagacgttttcgagctcatttcgtgggatttcgagtttatcctcgccg
tctaaatccacttgcagcgacagattcataccgtgcagatcttcttcgagactccatgct
ttcgatctgcaggataaggaaccgactacgcctgttaaagagggagggaacgaagcctac
tccagacttttgaaatctgagctttttggatctgattttgcttctccttgtttgtctcct
gcaggtcgtcaaggatctgcttcttctccgatgagtccatgtactaacatgttgagattc
aagacggatcgttccaattcaagccctagttcgccgttttctccttccattctcggaaat
gataatggtctctccagtgactcgtctccgcctccgaaaccgcctcgcaaggttcctaaa
acacctcataaggtcttggatgctccttccttacaagatgacttctacttgaatgttgtg
gactggagctcacagaatgttcttgcggttgggcttggtacttgtgtctatctttggacg
gcttccaatagcaaagtgacgaagttatgcgacctagggcctaatgacagcgtgtgctcg
gttcagtggacacgggaaggttcatatatatctattggtacaagtcatggtcaggttcag
gtttgggacggaatacagtgcaagagagtccgaaccatgggaggtcatcagacgagaact
ggtgtcttggcatggaactcaaggatcttatcatcagggagcagagacagaaacatcctt
caacatgatatccgagtccagagcgattatgtcagcaaactcgtggggcacaaatctgaa
gtctgcggtctgaaatggtctcacgatgatagagagcttgcgtctggaggcaatgataat
cagttattggtctggaacaatcattcacagcaacctattctgaagctgactgagcataca
gcagcggttaaggcaattacatggtctcctcatcagagcagcctccttgcttcaggaggt
ggaaccgcagacagatgcattagattctggaacacgacaaacggacatcagttaaacagc
attgacactgggagccaggtctgcaatctggcatggagcaagaatgttaacgagatagtg
agcactcacgggtactctcaaaaccaaatcatgctctggaagtacccatccatgtcaaag
gttgcaacacttactggccacagtatgagagtactttacttggctacgtcacctgatggc
cagactatagtgaccggagcaggagatgagaccctgcggttttggaacgtcttcccttca
gtgaaaatgcagacaccagtgaaggacacaggtctatggtcattggggaggacacagatc
cgataa

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