Arabidopsis lyrata (lyrate rockcress): 9307690
Help
Entry
9307690 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC9307690
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aly03016
]
9307690
Enzymes [BR:
aly01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
9307690
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
9307690
Prokaryotic type
9307690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
9307690
NCBI-ProteinID:
XP_020879038
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MAKALHFTRLIMSSSSARMCMTSSLFFSSVKPRRNIHKPYLASLFLSTTSTRYPLQYDMI
INRPTQSSLSQTRRRPPKAIESGAPDSAEPEFDSWVDNKLALEREQGRPGSGDPEMDKAK
RKYYSKRRKRLYGSDSEDESRRKSDEGFVELKPQVVEFDRLHQREEELYFYDTFAYPWEK
DKHYKMVYQLEKKYYPDQCLDKAFLQPGEVSKKGDDDSGKVRGKKKVVAALGGKRNEVKR
MGMENCVEDDDKLVFFDEVKEKKKPEDDVVVTEKKVEQFFKDLTKSPSEKGVTSGGGDGE
PFLVTRNGELPPRWDGPNGTVLLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATG
LLIVCIGKATKVVDRYQGMIKCYSGVFRLGEATSTLDADSPVIQREPWEHIKDDDIKKAL
TSFLGEIWQVPPMFSAIKVGGEKMYEKARRGETVELSPRRISIFQFDIERSLDDRQNLIF
RVICSKGTYIRSLCADLAKALGSCAHLTALRRDSIGEYSANDAWEFNELEAAITKNYF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggctctacacttcacaagactaataatgtcttcttcttcagcaagaatgtgt
atgacttcttctctcttcttttcctcagtcaaaccaaggagaaacatccataaaccctac
ttggcttctctcttcctttccacaacatctactcgataccctcttcaatacgacatgatc
atcaatcgtcccacacagtcttctctctctcaaacccgtcgtcgaccccctaaagcaatc
gaatccggtgcacctgactcagcagagccagagttcgattcatgggtcgacaataaacta
gctttagagcgtgaacagggtcgacccggttcaggagatccggaaatggataaagccaag
aggaaatactacagtaagagaaggaagagactatacgggtctgattctgaagacgagagc
cgcagaaaatcagatgaaggattcgttgaattgaaacctcaagttgtggaatttgatagg
ttacatcagagagaagaggaattgtatttctatgatacttttgcttatccatgggagaaa
gataagcattataagatggtgtatcagttagagaagaagtattatcctgatcagtgtttg
gataaggcgtttctgcaacctggagaagtttcgaagaagggtgatgatgattctgggaaa
gttagagggaagaagaaagtagtagcagcacttggtgggaagagaaatgaggttaaacga
atgggtatggagaattgtgttgaggatgatgacaagttggtgttttttgatgaagtgaag
gagaagaagaagccggaggatgatgttgttgttactgagaagaaagtggaacagttcttt
aaggatttaacgaaatctcccagtgagaaaggtgtgactagtggtggtggtgatggagaa
cctttccttgttacgagaaacggtgaacttcctcctagatgggatggtcctaacggtaca
gtgcttttggtgaacaaacccaaaggatggacttccttcactgtctgtggtaagctacga
cgattagtcaaagtgaaaaaggtcggtcatgctggaacacttgatcccatggctacgggt
ctgttaatcgtctgcattggtaaagccactaaggttgttgacagataccaaggtatgatc
aaatgttacagcggagtttttcgtcttggtgaagccacttcaactttagacgctgactct
cctgtgattcagcgagagccttgggagcatataaaagatgatgacattaagaaagctttg
acatcatttcttggagaaatatggcaagttccaccaatgttctctgcgataaaagttgga
ggcgagaagatgtacgagaaggcaagaagaggagaaaccgtagagctttctccaagaaga
atttcaattttccagtttgacattgaacgcagtttagatgacagacaaaatctgatattt
cgggttatatgctctaagggtacatacattagatctctctgtgcagatcttgcgaaagct
cttggaagttgtgctcacctcactgctctccggcgagattcaatcggtgaatattctgct
aacgatgcttgggaattcaatgagttagaagcagcaatcactaaaaactacttctag
DBGET
integrated database retrieval system
