Arabidopsis lyrata (lyrate rockcress): 9307760
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Entry
9307760 CDS
T01578
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9307760
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
9307760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_16
ABC_tran
AAA_25
AAA_27
Motif
Other DBs
NCBI-GeneID:
9307760
NCBI-ProteinID:
XP_002871691
UniProt:
D7M7H7
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MSERRAKRPKISRGGDDFLPGNIIDIELHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSLV
CAIALCLGGEPQLLGRATSVGAYVKRGEDSGYVKISLRGNTREEILTIFRKIDTRNKSEW
MFNGNTVCKKDIVEIIQKFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLP
VHHRALVDKSRDLKQLERAVAKNGETLNQLKALVDEQEKDVERVRQRELFLTKVDSMKKK
LPWLKYDMKKAEYMDAKKRMKEAQKKLDDAAGILNSMKEPIEKQKKEKAETDSKCKKVKN
LMDANGRNRCNLLEKEDEAEARVVATYKELEELKKQEEHRQERILKATEDLVAAEQELKN
LPVYERPVAKLEELSFQITELHQSMNRKKNQKVDNERLLSQKRHTLRQCVDKLKDMENAN
NKLLNALRNSGAERIFDAYQWVQQNRHEFKREVYGPVLVEVNVPNRENACFLEGHVPYYA
WKSFVTQDPEDRDLLVRNLKRFDVPVLNYVSAGGSQKAPFHISDQMRSLGIHARLDQIFD
APDAIKEVLTSQFGLDDSYIGSKITDQRAEEVSKLGITDFWTPDNHYRWSSSRYGGHSSA
SVDSVYQSRLLLCGVDVGELENLRSRKEELEDSISFMEETHKSLQTEQRLLEEEAAKLHK
EREEIVNVSHLEKKKRRELESRYQQRKTKLESLEQEEDMDASVAKLIDQVSRANADRYTY
AINLKKLLVEAVAHKWSYAEKHMASIELERKIRQSEFNIKQYEKTAQQLSLAVEYCKQEV
EGKQLRLASAKRDAESVAIITPELKKEFMEMPTTVEELEAAIQDNLSQANSILFVNENIL
QEYEHRQSQIYTISTKLEADKIDLSICMKEIDSLKEKWLPTLRQLVGQINETFSHNFQEM
AVAGEVSLDERDTDFDQYGIHIKVKFRESGQLQVLSSHHQSGGERSVSTILYLVSLQDLT
NCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSILNI
MNGPWIEQPSKVWSLGDSWGNLMRRTEASQCS
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacgtcgtgctaagcgccctaaaatatccagagggggagatgactttttgcct
gggaatataatcgatatcgagcttcataacttcatgacatttaatcatttggtatgcaaa
cctggatcacgtttgaaccttgtaattggacctaacggatcaggtaagagttctcttgtg
tgtgccattgctctttgtcttggtggtgagcctcagcttcttgggagagctaccagtgtt
ggagcatatgttaagcgcggggaagattctggctacgttaagatctctctcagagggaac
accagggaagaaattcttaccattttccgtaagatcgatacacgtaacaagtctgagtgg
atgttcaatggaaacacagtttgtaagaaagatatcgttgagattatacagaaatttaac
attcaagttaacaatctcacgcagttcctgccacaagatagggtttgcgagtttgccaag
ttaacgcctgtgcagctcctggaggagacggaaaaagctgttggtgatcctcagctgcca
gtccatcatcgcgcgctagttgacaaaagccgtgatctgaagcagcttgagagagccgtg
gcgaaaaatggagagacgctgaatcagcttaaagcccttgttgatgagcaagagaaggac
gtggagcgtgttaggcagagagagttgtttttgactaaggttgattccatgaagaagaaa
ttgccatggctaaagtatgatatgaaaaaggctgagtacatggatgctaagaagagaatg
aaggaagcccagaaaaaattggatgacgctgcagggattttgaacagcatgaaggaacct
attgaaaaacaaaagaaggagaaagcagagacagattcaaaatgcaaaaaagttaagaat
ctcatggatgcaaatggaagaaaccgttgtaacttgctcgagaaagaagatgaggcagaa
gcacgtgtagtggcaacatacaaagaactggaggaattgaagaaacaagaagaacatcgc
caagaaaggattctgaaagctactgaggatctggttgctgcggaacaagaactcaaaaac
ctgcctgtatacgaacgtcctgtagccaaacttgaagaattgagctttcagattacagag
ctgcatcagagcatgaaccgaaagaagaatcagaaggtggataatgagaggcttttgtct
cagaagagacacaccctgaggcaatgcgtagacaagttgaaggacatggagaatgcaaat
aacaaactcttgaatgcgttacgtaactctggagctgaaaggatatttgacgcatatcaa
tgggtgcaacagaatcgtcatgagtttaaaagggaagtgtatggtcctgttttggtagag
gttaacgttccaaatcgagagaacgcttgctttttggagggtcatgttccttattatgcc
tggaagtcttttgtcactcaggatcctgaggaccgtgatttgctggttagaaatctaaaa
cgattcgatgttcctgttcttaactatgtcagcgctggcggcagtcaaaaggcccccttt
catatttctgatcagatgcggtctcttgggatccatgctcggcttgatcaaatatttgat
gctcctgacgccatcaaggaggttttaacttcccagtttggtctggacgactcgtacatt
ggatcgaagattaccgatcagagggctgaagaagtctctaagttgggtattacagatttt
tggacaccagacaatcattaccggtggtcttcctcaaggtatggtggtcattcgtctgca
agtgtagactctgtatatcaatcacgtcttctattatgtggggtggacgttggagagctt
gagaatctgagatcaagaaaggaggaattagaagactctatttcattcatggaggaaact
cacaagagtcttcaaacagagcaaagactcttggaagaagaagcagctaaacttcataaa
gagagggaggagattgtaaatgtttcgcatctggagaagaaaaaacgccgtgagttggaa
tcccgttaccagcaaaggaagacaaagctagaatctttggagcaagaggaggacatggat
gcttcagttgctaagctgattgatcaggtttccagagctaatgctgaccgctatacatat
gcgatcaatctcaagaaattgcttgtggaggctgttgctcataagtggagttacgccgag
aagcatatggcttctattgaattggaaagaaagatcagacagtcggaattcaatatcaaa
caatatgagaaaacagcacagcagctatctctcgccgttgagtattgtaagcaagaggta
gaaggaaagcagctgcggctagcctctgccaagagggatgcagaatctgttgcaatcatc
acacctgaacttaaaaaggagtttatggagatgcctaccacagtcgaagaattggaagcg
gctatacaagacaatctgtctcaagccaattcgatccttttcgtaaacgagaacattctg
caagagtatgaacatcgccaaagtcagatatataccatttcgacgaagctcgaagctgat
aaaatagatctgagcatatgcatgaaagaaatcgattcgttaaaggagaaatggcttcca
acattgagacagcttgttggtcagataaatgaaacattcagccacaactttcaagaaatg
gctgttgcaggagaagtttcattggatgagcgtgacactgactttgatcaatacggaata
catatcaaagtgaaattcagggaatctgggcaacttcaggttctaagctctcaccaccaa
tccggaggagagcgttctgtctcaactatcctttacctcgtctctcttcaagatctgaca
aactgtcctttcagggttgttgatgagattaatcaaggtatggatcccataaacgaacgg
aagatgtttcaacaattggttagagctgctagtcaaccaaacacaccacagtgcttctta
ctgacaccaaagctcttgccggagctagaatacagtgaagcctgtagcattctgaacatc
atgaacggtccttggatcgagcagccttcaaaagtttggagccttggtgatagttggggc
aatctcatgagacgaaccgaagctagtcaatgttcttaa
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integrated database retrieval system
