Arabidopsis lyrata (lyrate rockcress): 9307815
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Entry
9307815 CDS
T01578
Name
(RefSeq) protein SMG9 isoform X2
KO
K18735
protein SMG9
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9307815
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
9307815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NB-ARC
ABC_tran
MMR_HSR1
AAA_29
MeaB
AAA_16
AAA_23
RsgA_GTPase
Lsr2
AAA_19
AAA_15
AAA_18
DO-GTPase2
AAA
Motif
Other DBs
NCBI-GeneID:
9307815
NCBI-ProteinID:
XP_002873799
UniProt:
D7M898
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MAGSSGGSQMSSPAAPKILLAKPSVSPITGKFGRGNSDDDNASHRSRLPPVSSLNMLSDS
WDFHIDRFLPFLTENTDFTVVGVIGPPGVGKSTILNAIYAFDGSSPGMLPPFSVQSDEIK
AAAKHCTIGIEPRVSAERFILLDVQPVFSPSILAEIIRPDSSSSVPVLGSDSLSAELAHE
IMCIQLGVLLASICHVLLVVSEGVHEDNMWHLMSTVDLLKHAIPDPSSPALSRLQISEIG
PEMEFKDKLSEGNEYMATPIFVHSKLQDQDLSPKNILQLRKALAQYFESSSFTAGRNGSE
LVEPVSSVIPSKSSRNQHESYQLAMWKLRDQVLSSKSTSFSRPVSEREWLKNSAKIWEMV
KNSPIIAEYSRALQSSGMFRR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggctggttcttcaggcggaagccaaatgtcatcaccggcagctcctaaaatccttctt
gctaaaccgtccgtttctccgattaccggtaaattcggacgcggcaactccgacgacgat
aatgcttcgcaccgctctcgtctccctcctgttagctctctgaatatgctctccgattct
tgggattttcacatcgatcgctttctccctttccttactgagaatacagacttcacggtg
gttggagtgattggacctccgggtgttggcaaatcgacaattttgaatgcaatctacgcc
tttgatgggagctcccctggaatgctaccgccattttctgtacagtctgacgagatcaaa
gcagcggcaaaacattgtactattggcattgaaccaagagtttccgctgagaggttcatc
cttcttgatgttcagcctgttttcagtccatccatattggctgagattatcagacctgat
agttcatcctcagtaccagtcttgggcagtgactctctgtcggctgagttggctcacgaa
atcatgtgcatccagcttggtgtcctcttagcatccatttgtcacgtgttgctggtggta
tctgaaggagttcatgaagataacatgtggcatctgatgtcaacggtggatttgttgaag
catgcaatacctgatccatcttctcctgcactttcccgtctacagatctctgagattggg
cctgaaatggaatttaaggacaaattatctgagggaaatgaatatatggctactcccata
tttgtgcactcaaagcttcaggatcaagatctctctccaaagaatatcttgcaactaaga
aaggcactggcgcagtatttcgaatcaagttcattcacagcaggaaggaatgggtcggag
ttagtcgagccggtttcttctgtgattccatctaaaagctcgagaaaccagcacgagagt
tatcaattagcaatgtggaaactaagggatcaggttttgtcttctaaatctacgtccttt
tcaagaccagtctctgaacgggagtggctgaaaaactcagcaaagatatgggagatggtg
aagaattctccgatcattgcagagtacagtagggctcttcaaagttccggtatgtttcgg
aggtag
DBGET
integrated database retrieval system
