Arabidopsis lyrata (lyrate rockcress): 9307830
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Entry
9307830 CDS
T01578
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04136
Autophagy - other
aly04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
9307830
04136 Autophagy - other
9307830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9307830
03029 Mitochondrial biogenesis [BR:
aly03029
]
9307830
Membrane trafficking [BR:
aly04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
9307830
Mitochondrial biogenesis [BR:
aly03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
9307830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
9307830
NCBI-ProteinID:
XP_002873820
UniProt:
D7LWZ2
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MTSQETASFLKGEVFFCEAEREGVTRKRMAKEAVKYVWEGAIPLQIYLHKSDVASHPAPP
PALVLAPRIGYLPLLIPLIKPYFKDSLPPGEDSIWFDYKGFPLKWYIPTGVLFDLLCAEP
ERPWNLTIHFRGYPSNILIPCEGEDSVKWNFVNSLKEAQYIINGNCKNVMNMSQSDQEDL
WTSVMNGDLDAYTRLSPKLKMGTVEDEFSRTTSLSSPQSGQVVAETDVAGQVKTARIPVR
LYVRSINKDFENLEDVLEIDTWDDISYLNRPVEFLREEGKCFTLRDAIESLLPEFMGDRA
QTSGEERSMDDTEEADGSRETGEIKLVRIQGIEMKLEIPFSWVVNNLMNPEFYLHICVLV
KAPQR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacaagaaacagcgtcgtttttgaaaggtgaggtttttttttgtgaagccgag
cgtgaaggtgtgacgaggaagagaatggcgaaggaagcggtcaagtatgtatgggaagga
gcaatacctctgcagatatatctccacaaatccgacgttgcttctcaccctgctcctcct
cctgctcttgtattagcaccaagaataggatatttgcctctgttgattcctcttataaag
ccttacttcaaggattcacttcctcctggtgaagattcaatctggtttgattacaaagga
tttcctttgaaatggtatataccaactggtgttcttttcgatctcctttgcgcagaacca
gaaagaccttggaatctgacgatacactttagaggatatcctagcaacattctgatacca
tgtgaaggagaagattccgtaaaatggaactttgttaattctttgaaagaggcacaatat
atcatcaatggaaattgcaagaatgttatgaatatgtctcagagtgatcaagaggatcta
tggacttctgtcatgaacggtgatcttgatgcatatacaagattatcacccaagcttaaa
atgggaacagttgaagatgagttttcaaggacaacaagtttgtcatctccacaatctgga
caagttgtggctgagacagatgtggctggtcaagttaagacagcaagaattcctgttcgg
ttatatgttcgaagtataaataaagattttgagaatcttgaagatgtactggagatcgat
acctgggatgacatctcgtacctaaatcgccctgttgagttcctcagagaagaagggaaa
tgctttaccttacgtgacgccattgaaagtctcctccctgagttcatgggagacagagcg
caaacgagtggagaagaaagaagcatggatgatacagaagaagcagatggttcgagggag
acgggtgaaatcaaattggtaaggatccaagggatagaaatgaagctagagataccgttt
tcgtgggtggtaaataacttgatgaacccagaattctatctccatatctgtgttcttgtg
aaagctccacaaaggtga
DBGET
integrated database retrieval system