KEGG   Arabidopsis lyrata (lyrate rockcress): 9307885
Entry
9307885           CDS       T01578                                 
Name
(RefSeq) protein PIR
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aly03019]
    9307885
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     9307885
   Factors involved in mRNA localization
    Other mRNA localization factors
     9307885
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd WASH-4_N
Other DBs
NCBI-GeneID: 9307885
NCBI-ProteinID: XP_020876826
LinkDB
Position
Unknown
AA seq 1282 aa
MAVPVEEAIAALSTFSLEDEQPEVQGPAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKA
LNQLNTLIQEGKEMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREI
QRWQSSASAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FIVESLELDFALLFPERYILLRVLPVLVVLATPSEKDTEALYKRVKLNRLINIFKNDPVI
PAFPDLHLSPAAILKELSVYFQKFSSQTRLLTLPAPHELPPREALEYQRHYLIVNHIGAL
RAEHDDFTIRFASSMNQLLLLKSNDGAYTEWCREVKGNMYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCRDAGETPEASGSYSDYEKVVRFNYTAEERKALVELVGYIKSVGSMLQRCDT
LVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTRPEHEM
PSSQHGNDESRGNFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRRPGGFFGNNGSEIPVN
DLKQFETFFYKLSFFLHILDYSASIGILTDLGFLWFREFYLESSRVIQFPIECSLPWMLI
DYILEAQNSGLLESVLLPFDIYNDSAQQALVVLRQRFLYDEIEAEVDHGFDIFVSRLSES
IFTYYKSWSASELLDPSFLFALDNGEKFSIQPVRFTALFKMTKVKILGRTINLRSLIAQR
MNKIFRENLEFLFDRFESQDLCAVVELEKLIDILKHSHELLSQDLSIDPFSLMLNEMQEN
ISLVSFSSRLATQIWSEMQSDFLPNFILCNTTQRFVRSSKVPPTQKPSVPSAKPSFYCGT
QDLNAAHQSFARLHSGFFGIPHLFSIVKLLGSRSLPWLIRALLDHISNKITTLEPMISGL
QEALPKSIGLLSFDGGVTGCMKLIREQLNWGTKSELKSEVLRGIKEIGSVIYTMGLLDIV
LREVDTKRFMQTAAWLGLIPGAEGQIVNAQDGESPLVNLLKSATSAVVSSPGCLNPAAFY
TMSKQAEAADLLYKANMNGGSVLEYTLAFTSASLDKYCSKWSAPPKTGFIDITTSKDFYR
IYGGLQIGYLEEITAPQSAQHEVLGDSIAWGGCTIIYLLGQQLHFELFDFSYQVLNVSEV
ETVSASHTHRNPQIHQGWEGLLEGMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPL
PRVRFENTVSAFETLPQKGTVA
NT seq 3849 nt   +upstreamnt  +downstreamnt
atggcagttcctgttgaggaagcaattgcagctctttccacattctccttagaggatgag
caaccagaagtccaaggaccggctgtaatggtttcagctgaaagagcagcaaccgatagt
cccatcgagtatagtgatgttgcagcatatcgtttgtctctatcagaagacacaaaagct
ctaaaccagctgaatacacttatacaagaaggaaaagagatggcgtcaattctatacaca
tatagaagttgtgtcaaagcactacctcagcttcccgaatctatgaagcatagtcaagcg
gatttgtatctagaaacatatcaagttttggacttagaaatgagtcgtttacgcgaaatt
cagagatggcaatcgtcggcttcagctaaattagctgctgacatgcagcggttttccaga
cctgaacggcgcatcaatggccccacagtcacacatctttggtcaatgctaaagttgctt
gacgtcttggttcagctggatcatcttaaaaatgctaaagctagtattcctaatgatttc
tcttggtataagagaacattcactcaagtcagtgcgcagtggcaagatacagatacaatg
agagaagagttggatgacttacagattttcctgagcacaagatgggctattttactcaac
ctgcatgttgagatgttccgtgtaaacaatgtggaagatattctccaagttctcatagtc
ttcatcgttgagtctctggagttggattttgcattactttttcctgagcgttatattctt
ctccgagttttacctgttcttgttgtcttagcaacaccatctgagaaagataccgaggct
ttatacaagagggtaaaactcaacagattgataaacattttcaagaatgatcctgtcatt
cctgcgtttccagatctccatctttcccctgctgcaattttgaaagagttgtcggtatac
tttcaaaagttttcatcacagactcgccttctgactcttccagcacctcatgagctccct
ccacgcgaagctctagaatatcagagacactatttgatagtcaatcatattggagctctc
cgtgccgagcacgacgattttacaatccgatttgcttcatccatgaatcagttattgctg
ttgaagtcaaacgatggagcatatactgaatggtgcagagaggtcaaaggaaatatgtac
gatatggttgttgaaggtttccaactgttaagtagatggacagcacgcatttgggagcaa
tgtgcttggaaattctctcgcccatgtagggatgcaggagagactccggaagcctccgga
tcatattctgattacgagaaggtggtgaggttcaattatactgcagaagaaaggaaagcc
ttggtagaacttgttggctatataaagagtgtaggatcgatgctgcagcgctgtgacaca
ttagttgcagatgctttatgggagacaatacatgccgaagttcaagattttgtacagaac
acgttagccacaatgttacgtaccaccttccgaaagaagaaagatctctcaaggattctt
tctgatatgcggacactttcagctgactggatggcaaataccaggcccgaacatgagatg
ccatcttcacaacatggaaatgatgaaagcagagggaatttcttttatccgaggccagtt
gccccaacagcagcacaggtgcattgcttgcagtttttgatatatgaggttgtctctggt
ggaaatctgaggaggccagggggattctttggaaataatggctctgagattcctgttaat
gacttaaagcaattcgaaacgttcttctacaagctcagctttttcttgcacatattggat
tactcggcaagtattggaatattgactgatctggggttcctatggtttagagaattttac
ctggagtcttcacgtgttattcagttcccgattgagtgttcactaccatggatgctgata
gactacattctggaagctcagaattcaggccttcttgagagtgttctgctgccttttgac
atttataatgactcagctcaacaagctctggttgttctgaggcagagattcctctatgat
gaaattgaagctgaggtggaccatggttttgatatatttgtttcaaggctctcggagtct
atattcacatattacaaaagttggtcagcaagtgagcttcttgatccatcatttctcttt
gccttggacaatggtgaaaagttctccatccagcctgtgagatttactgcgttatttaag
atgacaaaagtaaagatacttggtagaacaatcaatttaagaagtttgatcgctcaaagg
atgaataaaatctttagagagaatctggagtttctttttgaccgttttgagtctcaggac
ctatgtgctgtagtggaattggagaagctgatagatatcttaaagcactcgcatgaattg
ctttcacaagatctttccatagatcctttcagcctcatgttgaatgaaatgcaagaaaat
atatctcttgtctcattttcaagtcgacttgctacacagatttggtcagagatgcagagt
gatttcctaccaaacttcattctttgcaataccacacaacgatttgtccgttcatcgaaa
gttcctcctactcagaaaccatcagtgccttctgctaagcctagtttctattgtggcact
caagacttaaatgcagcgcatcaaagttttgcacgattgcatagtggatttttcgggata
ccacatttattttccatagttaaacttcttggatcaagatctctgccttggcttataaga
gctttgctggaccatatatcaaataagataacaacacttgagccaatgatctctggattg
caagaagcactgcccaagtctattggattgctttcttttgatggtggtgttacaggttgt
atgaagcttatacgagagcaactaaactggggcactaagtcagaactcaagtcagaagtt
ctacgaggaataaaggaaattggaagtgtgatatatacaatgggacttctcgatatcgta
ttgagagaggtcgacacaaagcgtttcatgcaaacagctgcatggctgggattaatccca
ggtgctgaaggacagatagttaatgctcaagacggcgaaagccctcttgtcaatctccta
aagtcagcaacttctgcagttgtgtcaagtcctggttgtcttaatccagctgcgttctac
accatgtccaaacaggcagaagctgcagatctattgtataaggcaaatatgaacggtgga
agcgttcttgaatacacacttgcattcacaagtgcgtcgctcgacaaatattgtagtaaa
tggagtgctcctccaaagacgggcttcattgatattacaacttcaaaggatttttaccgt
atatacggtggtcttcagattggatatctggaggagataacagctccacagtcagctcaa
catgaagtcctcggtgattcgattgcttggggtggttgcaccattatttacttgctcggc
cagcaacttcactttgagttgtttgatttctcgtatcaagtactcaatgtctctgaggtt
gaaactgtctctgcttcacatactcacaggaatcctcaaatccatcagggatgggaaggt
ttgttggaagggatgaagaaagctcggaggctgaacaaccatgtcttctccatgcttaaa
gctcgttgtcctctcgaagacaaaacggcttgtgccatcaaacagagtggtgcaccgctg
ccacgtgtcaggtttgagaatactgtgtctgctttcgagactctacctcagaaaggtacc
gttgcctga

DBGET integrated database retrieval system