Arabidopsis lyrata (lyrate rockcress): 9307894
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Entry
9307894 CDS
T01578
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR17
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
9307894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9307894
03036 Chromosome and associated proteins [BR:
aly03036
]
9307894
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
9307894
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
9307894
RSF complex
9307894
WICH complex
9307894
B-WICH complex
9307894
NORC complex
9307894
BRF complex
9307894
NuRF complex (fruit fly)
9307894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
DEAD
Myb_DNA-binding
HAND
HDA2-3
CHDII_SANT-like
DBINO
DUF1509
AAA_14
Motif
Other DBs
NCBI-GeneID:
9307894
NCBI-ProteinID:
XP_020878545
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MARASKREVSSDEAYSSEEEEQVNDQANVEEDDEELEAVARSAGSDEEDVAPDEAPVSDD
EVVPVEDDAEEDEEDEEKAEISKREKARLKEMQKMKKQKIQQILDSQNASIDADMNNKGK
GRLKYLLQQTELFAHFAKSDPAPSQKKGKGRGRHSSKLTEEEEDEECLKEEEGGTAGSGG
TRLLTQPACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR
GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTS
FEMAIKEKTSLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHE
LWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPP
KKETILKVGMSQMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAEP
GPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCR
IDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ
AQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNKDEL
LQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADF
YDFDDDNKDESKVDFKKIVSENWNDPPKRERKRNYSETEYFKQTLRQGAPAKPKEPRIPR
MPQLHDFQFFNIQRLTELYKKEVRFLMQAHQKTQMKDTIDVDEPEEVGDPLTAEEAEEKE
LLLEEGFSTWSRRDFNAFIRACEKYGRNDIKSIASEMEGKTEEEVERYAQVFQERYKELN
DYDRIIKNIERGEARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFM
ICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLIEKENQEYDER
ERQARKEKKLAKNATPSKQPSGRQANESPSSLLKKRKQLSMDDYVSSGKRRK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggctagagcttcgaagcgggaagtttcttcggacgaggcttactcgtcggaggaagag
gagcaagttaacgatcaggccaatgtggaagaagatgatgaagagctcgaggccgtcgct
cgctctgcgggttctgacgaggaagatgttgcgcccgacgaagcacctgtctctgacgac
gaggttgtccccgtagaagatgacgctgaagaggacgaagaagacgaggaaaaagcagag
atcagcaaacgtgagaaggctagactcaaggaaatgcagaagatgaagaagcagaaaatt
cagcaaattttagactcccaaaatgcttccatagatgcagatatgaacaataaaggaaag
gggagattgaagtatcttctgcagcaaactgagttatttgcacattttgctaaaagtgac
ccggctccgtcccagaagaaggggaaaggaaggggtcgccattcttccaaactaactgag
gaagaggaagatgaagagtgtttaaaagaagaagagggtggtacagctggatctggaggc
acacggttgctcacacagcccgcttgtattcagggaaagttaagagattaccaattagct
ggtttaaactggctcattcggttgtacgagaatggcataaatgggattctggcggatgaa
atgggtctggggaaaacgcttcaaaccatttctttgttggcttacctgcatgagtacagg
ggaattaatggccctcatatggtagttgctccaaaatcaacccttggtaactggatgaat
gaaattcgccgattttgtcctgtcctgcgtgctgtgaaatttctcggtaatcccgaggaa
aggagacatattcgtgaagaactgctagttgcagggaaattcgacatttgtgttacaagc
tttgagatggctatcaaagagaagacatcattgcgccgttttagctggcgatatataatc
attgatgaagctcatcgaattaaaaatgagaattcactcctttcgaaaaccatgagactt
ttcagcaccaactatcggcttcttatcacgggaaccccccttcagaataatctccatgaa
ttgtgggccctcctcaattttcttctccctgaggtttttagttcagcagaaacttttgac
gagtggtttcaaatttctggtgaaaacgaccagcaagaagttgttcaacaacttcacaag
gttctgcgaccatttcttcttcggaggttaaaatcagatgtagagaaaggcttacctccg
aaaaaggagacaatactcaaagttggcatgtctcaaatgcaaaaacagtactacaaggct
ttactgcagaaggatcttgaagtggttaatggtggtggagaacgcaaacgtctgttgaac
atagcaatgcaattgcggaaatgctgcaatcacccttatctcttccagggtgcggagcct
ggtcccccatataccacaggagatcaccttgtaacaaatgcaggtaagatggttctctta
gataaattgctacctaagttgaaggatcgagattcaagggttctgatattttctcagatg
acaaggcttttggatattcttgaggattatctaatgtatcgcggttaccagtactgtcgt
attgatggaaatactggtggtgacgaacgagatgcttccatagaagcctacaacaagcca
ggaagtgagaaatttgttttcttgttatccactagagctggaggacttggtatcaatctt
gctactgcagatgttgtgatcctctatgatagtgactggaaccctcaagttgacttgcaa
gctcaggatcgtgcacataggattggtcaaaaaaaagaagttcaagttttccggttttgc
accgagaatgctattgaggcgaaagtcattgagagggcttacaagaagttggcacttgat
gctctggttattcagcaagggcgattggcagaacagaaaactgttaataaggatgagttg
cttcaaatggtgagatatggtgctgaaatggtgtttagttctaaagatagcacaattacg
gatgaggatattgacagaatcattgccaaaggagaagaggcaacggctgaacttgatgcc
aagatgaagaaattcactgaagatgcaatacagtttaaaatggatgacagtgctgacttt
tatgattttgatgatgacaataaggatgagagcaaggtggattttaaaaagattgtgagt
gaaaattggaatgatccaccaaaaagagagagaaagcgcaactactctgaaactgaatac
ttcaagcaaacactgcgacaaggtgctccagctaaacctaaagagcctagaattccacgc
atgccccaattgcatgattttcagttctttaacattcagaggttgactgagctgtacaaa
aaagaagtgcgcttccttatgcaagcacatcagaaaactcaaatgaaagacacaattgac
gttgatgaacctgaagaagttggagatcccttaactgctgaagaagcggaagaaaaggag
ctattgctggaagagggtttctcaacatggagcagaagagacttcaatgccttcattagg
gcttgtgagaagtatggccggaatgacataaagagtattgcctctgagatggaagggaaa
actgaggaagaggttgaacgatatgctcaagttttccaagagcgatataaagagctgaat
gattatgacagaatcatcaagaatattgagaggggggaagcaagaatctctaggaaagat
gaaatcatgaaagctattgggaagaaactggatcgctacagaaacccgtggctggaactg
aagattcagtatggtcagaacaaagggaagctgtacaatgaagagtgcgaccgtttcatg
atatgcatggtccataaacttgggtatggaaactgggatgagctaaaggcagcgtttcgg
acatcccccttgttcaggtttgactggtttgtaaaatcccgcacaactcaggaacttgca
aggagatgtgacacactaatcaggttgattgagaaagagaatcaagaatatgatgagaga
gagaggcaagcccgcaaagagaagaaacttgcaaagaatgcaacgccatcaaagcaacct
tcgggtaggcaagcaaatgagagcccttcatctcttctgaagaaacgaaagcagctgtca
atggatgattatgtgagctcgggaaagcgtaggaaataa
DBGET
integrated database retrieval system
