Arabidopsis lyrata (lyrate rockcress): 9307950
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Entry
9307950 CDS
T01578
Name
(RefSeq) RAN GTPase-activating protein 2 isoform X2
KO
K14319
Ran GTPase-activating protein 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9307950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9307950
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
9307950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NLRC3
WPP
LRR_6
LRR_CARMIL
LRR_TMOD-LMOD
LRR_4
LRR_MHP1-HER1-GIP3
LRR_NLRC4
LRR_SKP2
CntK_N
DUF1462
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
9307950
NCBI-ProteinID:
XP_002873940
UniProt:
D7LZ68
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MADTLDSRPHAFSIKLWPPSLPTRKALIERITNNLSLKTIFTEKYGSLTKDQAMEDAKRI
EDFAFSTANQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPVATRDLISEDSSASPRE
TFFDISKGQRAFIEADEADELLKPLKEPGNAYTKICFSNRSFGLGAARVAEPILASLKDQ
LKEVDLSDFVAGRPEVEALEVMNIFSDALQGSILSSLNLSENALGEKGVRAFGALLKSLS
SLEELYLMNDGISKEAAQAVSELIPSTENLRVLHFHNNMSGDEGALAIAEVVKRSPLLEN
FRCSSTRVGSEGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHLTELYLS
YLNLEDEGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLKKLNLSENE
LKDEGCVQIAKSMEEDHSKLQYIDMSTNFIRRAGARALAHVVVKKEAFKLLNIDGNIISE
EGIEELKEIFKKSPELLGALDENDPDGEEEDDDEEDEEDEENEGNGNGELESKLKNLEVK
QED
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacgcttgattcccgacctcatgcattttcgattaaactctggccaccgagt
ttacctacaagaaaagctctcattgagcgcattaccaacaatctctccttaaagaccatt
tttactgaaaagtacggtagcttaaccaaagaccaggctatggaggatgctaagaggatc
gaggactttgctttttccactgctaaccaacagtttgagagggaacctgatggtgatggc
ggttctgctgtacagctttatgctaaagaatgcagtaagcttatcttggaagttctcaag
aaaggccctgttgccactagagatttgatttctgaggattcttctgcgtctccccgtgaa
acttttttcgatatttctaaaggccaacgggctttcattgaggctgacgaggctgacgag
cttctcaaacctttgaaggaacctggcaacgcttacactaagatatgctttagcaatagg
agtttcggcttaggagctgctcgtgtcgctgaacctatcttggcgtctctgaaagatcag
cttaaggaagttgacttgtcagactttgttgctggacgacccgaggttgaagctcttgag
gttatgaatatattttctgacgcacttcaaggtagtattctctcatctctcaacttatca
gagaatgcattgggtgagaagggtgttagagcatttggggcactcttaaaatctctgagc
tctttggaagagctgtatttgatgaacgatggtatctctaaggaagctgcacaagcggtc
tccgagttgattccttcaacagagaatttgagggtccttcattttcataataacatgtcg
ggagatgaaggagcactcgcaattgcagaggttgtcaagcgttcgccactgctggagaat
ttccggtgttcttccacaagagtcggatcagaagggggaatcgccttgtcagaagcactt
gagcattgtactcatatggagaaacttgatctgcgagataatatgtttggcacagaagcc
ggagtttctctgagcaaaactctttcaagcttcaaacacttgactgagctttacttgagt
tatcttaatctagaggatgaaggtgccatagccatagtaaacgctctaaaggagtctgct
tcgcccattgaagttttagagatggcaggaaatgacataacagttgaagctgcttcagct
atcgcagcctgtgtagcagcaaaacaagatctgaaaaagttgaatttgtctgagaatgag
ctgaaagatgagggatgtgtccagattgcaaagagtatggaagaggatcattcgaaattg
caatacatcgatatgagcacgaatttcataagaagagccggagcacgagccttggctcat
gttgttgtaaagaaggaagctttcaagctgttgaacatcgacgggaacatcatatcagaa
gaaggcattgaagaattgaaagagatattcaagaaatctccagagttacttggagctttg
gacgagaatgatcctgatggagaagaagaagatgatgatgaggaagacgaagaagatgaa
gagaacgaaggtaacgggaatggtgagctggaatcgaagctgaagaaccttgaagttaag
caggaagattaa
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integrated database retrieval system
