Arabidopsis lyrata (lyrate rockcress): 9307952 Help Entry 9307952           CDS       T01578                                  Name (RefSeq) protein SMG7 isoform X1   KO K14409   protein SMG7 Organism aly  Arabidopsis lyrata (lyrate rockcress) Pathway aly03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:aly00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     9307952  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aly03019]     9307952 Messenger RNA biogenesis [BR:aly03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Other surveillance factors      9307952    mRNA cycle factors     Common to processing body (P body) and stress granule      9307952 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  EST1_DNA_bind EST1 eIF3a_PCI_TPR-like Rhamno_transf Motif Other DBs NCBI-GeneID:  9307952 NCBI-ProteinID:  XP_020879393 LinkDB All DBs Position Unknown AA seq 1052 aa AA seqDB search MMTLQMDKTTACSPRERAKSILDKTFALENKRWKAAQTRNPPDLNLWQQIRENYEAIILE DHTFSEQHNIELTLWQLHYKRIEDFRSHINASKGPSKPDVIANHKLQFRTFLSEATGFYH DMILKIRSKYGLPLGYFSEDQETQHLADKDGKKLPEVKLALVSCYRCLIYLGDLARYKGL CGEGDSKNREYAAASSYYLQAASLLPAYGNPHHQLAIVASYLGDEFTTTYRYFRSLAVEI PFPTARDNLIVAFEKNRQSYAQLFVASKDSSRRPTGKGRGKGEDPSSKDANLIAGPVKDK VTISNEMLKAFCTRFLRLNGILFTRTSLETFFDVLASTSSSLREVISSGSVDELSLGIDT SDSALFIVRLVTILIFSVHNSKKETEGQSYAEIVQRVEPARNSLTASFELLGHVIEKCVQ LGDPSSSYFLPGVLVFVEWLACCPDVALGSDPDDRQTAVRNSFWNQCVTLFNQILSLGPM FIDDVEDETCFSNMSLYDERETENRLALWEDYELRGFLPLLPAQTILDFSRKHSFGTEGP KEKKARIKRILAAGKALTSVIKVDQNHVYFDSKKKKFLVGIKPSDDLLDSHSSPPKACNT LQDNQVMMNHNSPVMQLGQQIYMGEEDDDDEVIVFKPLVTEKKKEASDQIYVPSGGFRKP DQVATMGDFKALSGSDAAFHENQLLQARGNASIQVPASVGSNLLGLLQPSTQAQAMHMQQ VQTQVQVPGSVGSNLLGLLQPSTQSKAMHMQQVQTQAVNPQPAQSLAAARLQPMQSQVAQ LQPLPSRVVHFQQTQAQLSHVSAAQTQSASFVGGSKWSPEEAASLASSLSGFAQMGNGHL MRNEMQGNHGVSYYPAHPLPVHQSYNVNGMGGMPYSQSRTSEAVLTPKIDTVLSAGVVAD GLGVQSSLAKKNPISRAIRHLGPPPGFNSVPSKLQKEPAPGSDFSGNNNLPVDDYSWLDG YQAQSSRGAGPNSSLNYAASGKPEHMGGTSNVLNGVANFPFPGKQVPTSQVQADFPYFQN PQKDNFVDKNHQSAQLPEQYQGHSTWSSRHFV NT seq 3159 nt NT seq  +upstreamnt  +downstreamnt atgatgactttgcagatggataaaactactgcttgctctccaagggagcgagccaagtcc atacttgataagacttttgcgttagaaaacaagcgttggaaggctgctcagactcgaaat ccacctgacttaaatttgtggcagcaaattcgtgagaattatgaagcaataattcttgaa gatcataccttttctgagcagcacaacattgaattgactctgtggcagttgcattacaaa cggattgaagactttagatcacacatcaatgctagtaagggtccctctaaaccagacgta attgcaaaccacaagctgcagttcagaacattcctttcagaagcaactgggttttaccat gatatgatcttaaaaattagatcaaagtatggtcttcccctgggttatttttctgaggat caagagactcaacatttggctgataaggatggaaagaagttaccagaagttaaattagcc ttggtatcatgttatcgttgcttaatataccttggtgatctggctcggtataaaggattg tgtggcgagggggattccaagaacagagagtatgctgctgcttcaagttactatttgcaa gcagcttctctattgccagcctatggaaacccacatcatcagcttgctatagttgcttct tatttgggggatgagtttacaacaacatatcgttatttccgaagtttggctgtggagatt cctttcccaactgcccgtgacaacttgattgttgcttttgaaaagaatcgtcagagttat gcccaattgtttgtggcttccaaagactcatccaggaggccaactggtaaaggaagaggt aaaggtgaagatccttcatcaaaagatgcgaacttgatagctggtcctgtgaaggataaa gtaactatttcaaatgagatgctcaaagcattctgcactagatttcttcgtctcaacggg attctttttacccggacaagcctggagacattctttgatgttcttgcctccactagcagc agtttacgagaggtgatttcttcgggctcagttgacgagctgagtttgggcatagacacc agtgacagcgcacttttcattgttagactcgtgacaattcttatatttagcgtccataac tcaaagaaagagacagaaggtcagtcatatgcagagattgtacagcgtgttgagcctgcc agaaactccttaacggctagctttgagttacttggacacgtaatagagaagtgtgtgcaa ctgggagatccttcgtcgagttacttcttgcccggtgtcttagtttttgttgaatggttg gcctgttgtcctgatgttgcactgggaagtgatccggatgatagacagactgctgtaaga aatagcttttggaaccagtgtgttaccttgttcaatcaaatcttgtcgcttggacctatg tttattgatgatgtcgaagacgagacttgcttctcaaacatgagcttgtatgatgaaaga gaaactgaaaaccgacttgcactatgggaggactatgaactaagaggattcttgccactg cttccagctcagaccattctcgacttctcaaggaaacattcctttggaactgaaggtccc aaggaaaagaaagctcgtataaagaggattttagcagcagggaaagctttgaccagtgtg atcaaagttgatcagaatcatgtatattttgattcaaagaagaagaagtttcttgttggt ataaaaccgtcagatgacttgctggattctcattcaagcccacctaaagcttgtaatact ttgcaagataaccaagtaatgatgaatcataactcgccagtgatgcagcttggtcagcag atttatatgggtgaggaggatgatgatgatgaagtaattgttttcaagcctctagttact gaaaagaagaaagaggcttctgaccaaatatatgttcctagtggaggcttcaggaaacct gatcaagttgctactatgggggactttaaagctttaagtggttctgatgcagcttttcat gaaaatcaacttctgcaagctagaggcaatgcgagtattcaagtacctgcatctgttggt tctaaccttctgggacttcttcagccatcaacccaggctcaagctatgcatatgcaacaa gttcagacgcaggttcaagtgcctggatctgttggttctaaccttctgggacttcttcag ccatcaacccagtctaaagctatgcatatgcaacaagttcagacgcaggcagtgaatcct cagccagcccaatcactagctgctgcaagacttcagccaatgcaatcacaggtcgcacaa cttcaaccactgccatcacgggttgtgcactttcaacaaactcaggcacagctttcacat gtttcagcggcccagacacaatctgcttcctttgttggtggtagcaagtggtcaccagag gaagctgcttctcttgctagtagcctatctggttttgctcagatgggtaatggtcatcta atgaggaatgagatgcaaggaaatcatggagtttcctattaccctgcacacccattaccg gtccaccagtcttacaatgtcaatggtatgggtggtatgccatattctcagtcacgaaca tctgaagctgtattgacacccaaaattgatactgttttgtcagccggagttgttgctgat ggcctgggcgtccaatcttcgttagcaaagaaaaatccaatcagtagagccattaggcat cttggccctccgcctgggtttaactctgttccctctaagctgcaaaaggagccagcacct ggttcggatttttctggcaacaacaatctaccagttgatgattacagctggttggatgga taccaagctcaatcttctcgaggcgctgggccgaacagttctttgaattatgccgcctct gggaaaccagaacacatgggtggtaccagcaatgtactgaacggggttgccaactttccg tttcctggaaaacaagttccaacatcacaggtccaagcagattttccttatttccagaac cctcagaaagataactttgtggacaaaaatcatcagtcagctcaactccctgagcaatat caaggacattcgacttggtcgagtcgtcactttgtgtga

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