Arabidopsis lyrata (lyrate rockcress): 9308034
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Entry
9308034 CDS
T01578
Name
(RefSeq) protein argonaute 8
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9308034
03036 Chromosome and associated proteins [BR:
aly03036
]
9308034
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
9308034
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
9308034
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
9308034
microRNA pathway
RISC loading complex
9308034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
9308034
NCBI-ProteinID:
XP_020878616
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MERESVKNKSILLPMARRGNGSKGKKIHLLTNHFRVNFSQPNNHDFFHYSVAITYEDGSP
VEAKGIGRKILEKVQQTYQTDLGFKHFAYDGDKNLFTAGPLPGSNLEFSVVLEDMSSRRN
AGKRLRLSHQSKKFNVAISFAAKIPMKAIANALQGKETNHFQDAIRVMDVILCQNAARKG
CLLVRQSFFHNDAKYFTNIGEGVDCCKGFHSSFRTTQGGLSLNIDVSTTMIVKPGPVVGF
LIGNQGVKDPFSINWKKAKSTLKNLRVKVIPSNQEYKITGLSGLHCKDQMFTWKKKNQNG
EVEEVEITVFDYFTKIRDIKLHYSGGLPCINVGKPNRPTYFPIELCELVSLQRYTKALTS
FQRSNLVKESRQNPHQRMEVLTRALKNSNYSDDPMLQECGVRIGSDFTQVEGRLLPTPKL
KAGNEQDIYPKNGRWNFNNKIVFESATVTRWAVVNFSARCDPRKIVRDLIRCGNMKGINV
DPPYKVVFEEDPQFKDAPGSVRVEKMFERLESTLGDVPPNFLLCILEKKNSDVYGPWKKK
NLVQVGIVNQCIAPPQNVNDHYLTNVLLKINAKLGGLNSVLDMERSRAMPLVMKVPTIII
GMDVSHGSPGQSDVPSIAAVVSSREWPLISKYRACVRTQSRKVEMIDNLFKPVSDKDDEG
IMRELLLDFYSSSAVKPNHIIIFRDGVSESQFNQVLNIELDQMKQACKFLEEKWDPKFTV
IIAQKNHHTKFFQTRSPDNVPPGTIIDSNICHQHNNDFYLCAHAGMIGTTRPTHYHVLYD
EIGFDTDQLQELVHSLSYVYQRSTTAISLVAPICYAHLAAAQMGTAMKFEDISETSSSHG
GITIAGAVSVPPMPKLNTKVASSMFFC
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaacgggaatctgtgaagaacaagagtatacttcttccaatggctcggcgtggcaac
ggttccaaaggaaagaagattcatctgctcactaaccactttagagttaacttcagtcaa
ccaaacaatcatgatttcttccattacagcgttgctatcacatatgaagatggtagtcca
gttgaagccaagggtattggtagaaagattcttgaaaaagttcaacagacttatcaaact
gatttgggtttcaaacactttgcttatgacggcgacaagaatcttttcactgccggtcct
cttcccggatccaatctagaattctctgttgttcttgaagacatgtcttctaggagaaat
gcaggcaaaagactaaggctttctcaccaatccaagaaattcaatgttgcaatcagcttt
gctgcaaaaatccctatgaaagctattgcaaatgctcttcaaggaaaggaaacaaaccat
tttcaagatgctatcagagtgatggatgttattttgtgccaaaatgcagctcggaaaggt
tgcctcctagttcgccaatctttcttccacaatgatgcaaagtactttacgaatatcggt
gaaggtgttgattgttgcaaaggattccattcaagcttcagaactactcagggaggcttg
tccctcaatattgatgtttcgactacgatgatagtaaaacctggtcctgttgttggtttt
cttattggaaaccaaggtgtgaaagatccattctctattaactggaaaaaggctaaaagt
actctcaagaatcttagagttaaagtcatcccctcaaatcaagaatacaagataaccgga
ctaagtggactacactgcaaagatcaaatgtttacttggaagaaaaagaaccaaaacggg
gaagttgaggaggttgagattacagtgtttgattacttcaccaaaatccgtgacatcaaa
ctgcattattcaggtggcttaccatgtatcaatgttggtaagccaaatcgtcctacctac
tttcccattgagctctgtgagcttgtatctctacaacgctatactaaagctcttacaagt
tttcagaggagtaaccttgtcaaagaatcaaggcaaaaccctcatcaaagaatggaagtg
ttaaccagagctctcaagaacagtaattatagtgatgacccaatgttgcaagaatgtggt
gttagaataggctctgacttcactcaagtcgaaggtcgcttgttaccaacacccaagctt
aaagctggcaatgaacaagacatctatcctaagaatgggcgttggaacttcaataacaag
atagtttttgagtcagcaacagttactagatgggccgttgtgaacttctctgctcgctgt
gacccgcgcaagattgttcgtgatttgatcagatgtggaaatatgaaaggaattaacgta
gatcctccatacaaagttgtctttgaagaagatcctcagtttaaggatgcaccaggttct
gtaagagttgaaaagatgtttgaacgtttagaatccacactcggtgacgttcctccaaat
ttccttctatgcatactcgaaaagaaaaactctgatgtttatggtccttggaaaaagaaa
aatcttgttcaagttggaattgtgaatcagtgtattgctcctcctcaaaacgttaatgat
cattatctcacaaatgttctcctcaagataaatgccaagcttggtggattgaattcagtg
ttggatatggagcggtcacgggcaatgcctttggtaatgaaagttcctaccatcattatt
gggatggatgtatctcatggttctcctggacagtctgatgtaccatccattgccgcggtt
gtgagctccagagaatggccactgatctcaaaatacagggcttgtgtgcgtacacagtcg
cgtaaagttgaaatgatcgataacctctttaaaccagtctctgacaaagatgatgaaggt
atcatgagggagctcttgcttgacttttactcaagttctgcagtcaaacccaatcacatt
attattttcagggatggtgtgagtgaatctcagtttaaccaagttcttaatattgaactg
gatcagatgaagcaagcgtgcaagttcttggaggagaagtgggatcccaagtttacagtg
atcatagctcagaaaaaccaccacaccaagttcttccagaccaggagccctgataatgtt
cctccaggaacaataattgatagcaacatctgtcaccaacacaacaacgatttctatctt
tgtgctcatgctggaatgattggaactacaaggccaacacattaccatgtgctgtatgac
gagattggatttgacacagatcaactccaagaacttgtgcattccctatcctatgtctac
cagcggagcacaactgcaatctctcttgttgcgccgatatgttatgctcatttggcggct
gcacagatgggaactgcgatgaagtttgaggacatttctgagacttcgtcgagccacggc
gggatcaccatagctggagcagtctctgtgccaccaatgccgaagctgaacaccaaggtt
gctagttcaatgttcttctgctga
DBGET
integrated database retrieval system
