Arabidopsis lyrata (lyrate rockcress): 9308040
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Entry
9308040 CDS
T01578
Name
(RefSeq) protein argonaute 9
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9308040
03036 Chromosome and associated proteins [BR:
aly03036
]
9308040
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
9308040
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
9308040
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
9308040
microRNA pathway
RISC loading complex
9308040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
9308040
NCBI-ProteinID:
XP_020877222
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MDSNEPNGSGVMQKGGLPPPPPVVPTNVVPEVEPVKKNILLPMARPRGSGSKGQKIPLLT
NHFGVKFNKASGYFFHYSVAISYEDGRPVEAKGIGRKILDKVQETYQSDLGSKYFAYDGE
KTLFTVGALPSNKLDFSVVLEDIPSSRNNAGNDTNDGDRKRSRRPNQSKKFMVEISYAAK
IPMQAIASALQGKETENLQDALRVLDIILRQSAARQGCLLVRQSFFHNDVKNFVPIGGGV
SGCRGFHSSFRTTQGGLSLNIDTSTTMIVQPGPVVDFLLANQNKKDPYGVDWNKARRVLK
NLRVQVTLSNREYKISGLSEHSCKDQMFTWRKPNDKGEFEEVEITVLNYYKERNIEVRYS
GDFPCINVGKPKRPTYFPIEFCNLVSLQRYTKSLTNFQRAALVEKSRQKPPERMASLTKG
LKDSNYNADPVLQDSGVSIITNFTQVEGRILPTPKLKVGNGQDFTPNNGRWNFNSRKLVE
PTTVTRWAVVNFSARCDTNALIRDLIRCGQSKGINVEPPFKDVINENPQFRNAPATVRVE
NMFEQIKSKLPGQPLFLLCILSERKNSDVYGPWKKKNLVDLGIVTQCIAPTRVNDQYLTN
VLLKINAKLGGLNSLLAIERSPAMPKVTQVPTIIVGMDVSHGSPGQSDIPSIAAVVSSRQ
WPLISKYKACVRTQSRKMEMIDNLFKPVSGKDEGMFRELLLDFYYSSEKRKPEHIIIFRD
GVSESQFNQVLNIELDQMMQACKFLDEHWNPKFTVIVAQKNHHTKFFQSSRPDNVPPGTI
IDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATDDLQELVHSLSYVYQRSTT
AISVVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITTPGAVPVPPMPQLNDKVATSMF
FC
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggattctaatgaaccgaatgggagtggcgtaatgcaaaagggagggttaccacctcca
ccacctgtcgttccaacaaatgttgtccctgaagtggagcctgtaaaaaagaacattctt
ctcccaatggctcggcctagaggcagtggttccaaaggacagaagattcctcttcttact
aatcactttggagtcaagtttaacaaagcaagcggttacttctttcattacagtgttgct
atctcatatgaagatggccgtccagtggaggctaaaggtattggcagaaagattcttgac
aaagttcaggagacctatcaaagtgatttggggtccaaatactttgcttatgatggcgag
aagactctcttcactgttggtgctcttcccagcaacaaacttgacttctctgttgttctt
gaagacataccttctagcagaaataacgctggaaatgatacaaatgatggggataggaaa
agatcaaggcgtcccaaccaatctaagaaattcatggttgagataagttatgctgcaaag
atccccatgcaggctattgcaagcgctcttcaagggaaggagacagagaatcttcaagac
gctctaagagtgctggatattattttgcgccagagtgcagctaggcaaggttgcctcctt
gttcgccagtcttttttccacaatgacgtaaagaactttgtacctattggtggaggtgtc
agtggttgcagagggttccattcaagtttcagaactactcagggaggcttatccctgaat
attgacacttcaactacgatgattgtacaacctggacctgttgttgatttcctgcttgca
aaccagaacaagaaagatccatacggtgtggactggaacaaggctcgtcgtgttctcaag
aatctgagagttcaagttactctttcaaatagagaatacaagataagcgggctaagtgaa
cacagctgcaaagatcaaatgtttacatggaggaaacctaacgacaagggggaatttgag
gaggttgagatcacagtgctcaattactataaagagcgtaatattgaagtgcgatattca
ggtgacttcccttgcatcaatgttggtaagccgaagcgtcccacttacttccccattgag
ttctgtaatcttgtgtctcttcagcgatacacaaaatcgcttaccaattttcagagggct
gcactagtagaaaagtctaggcagaagccaccagaaaggatggcctcactaaccaaaggt
ctaaaggacagcaattataatgccgacccggtgttgcaagatagtggtgtcagcattatt
accaacttcacccaagttgaaggccgcatcttaccaacaccaaagctgaaagtggggaac
ggacaggactttaccccaaacaacgggcgctggaactttaatagcaggaaacttgttgag
ccaacgactgttactagatgggctgttgtgaacttttctgctcgttgtgatacaaatgcg
cttattcgcgacttgattagatgtggacagtcaaaaggaattaatgtagagcctccattc
aaggatgtcattaacgaaaatcctcagtttaggaatgcaccagctactgtgagagtagag
aatatgtttgagcagataaaatccaaactcccagggcagcctctgttcctactttgcata
ctctcagaaaggaaaaactctgatgtttatggcccttggaaaaaaaagaatcttgttgat
cttggaattgtgactcagtgcattgctcccacaagagtgaacgatcagtatctcaccaat
gttctcctgaagataaatgccaagcttggtggattgaattcgctgttagcaatagagcgc
tcaccagcaatgccaaaagtaacgcaagttcctactatcattgttgggatggatgtatcc
catggttcccctggccagtctgatataccatcaattgcagcggttgtgagctccagacaa
tggccactcatctcaaaatataaggcatgtgtacgcacacaatcgcgcaaaatggaaatg
attgataatctcttcaaacccgtctctggcaaagacgaaggaatgttcagggagctgttg
ctcgacttttactacagttctgagaagaggaaaccagagcacatcattatattcagggat
ggtgtgagtgagtctcagttcaatcaagttcttaatattgaattggatcagatgatgcag
gcatgcaagtttcttgacgaacactggaatccaaagtttacagtgatcgttgcccagaag
aaccaccacaccaagttcttccagtcgagtcgccctgataatgttcctccaggaacaata
attgacagccagatctgtcacccacgcaactttgatttctatctctgcgcccatgccggc
atgattggaactacaaggccaacacattaccatgtgctgtatgacgagattggatttgcc
acagatgaccttcaagaacttgtgcattctctatcctatgtctaccagaggagcaccact
gcgatctcagtcgttgcaccagtttgttatgcgcatttggcagctgcacagatgggaact
gtgatgaagtatgaagagttgtctgagacttcttcgagccatgggggaatcaccacaccc
ggagcagtccctgtgcctcccatgccgcagctgaacgataaagttgcaacctccatgttc
ttctgctga
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