KEGG   Arabidopsis lyrata (lyrate rockcress): 9308046
Entry
9308046           CDS       T01578                                 
Name
(RefSeq) F-box/LRR-repeat protein 20
  KO
K15082  DNA repair protein RAD7
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aly03400]
    9308046
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      9308046
SSDB
Motif
Pfam: LRR_6 LRR_At5g56370
Other DBs
NCBI-GeneID: 9308046
NCBI-ProteinID: XP_020879124
LinkDB
Position
Unknown
AA seq 558 aa
MNSSDIPNDSRGNRRITSDEEAIEALLMAANEVENRDLPLGFQNHDVEMEERKSTDLDDE
DEAYLANWQKQWAEEQAARKRRHDYEVSRNYKVARTFALDLHSDLKIVEKTEEEEEVIRD
EEKSEFQRAKESIKKRREEISTTSDMEIDPMTVLRKAPTLVELSARVLAQNIVAIKSLKL
VPDHLRKKLSYLVSGLGKVDTRLMELLIEDSPNEICAKNCVELEEDDLIKILCDCDRVSL
KVLILDLCGRSITDYTIREFFKRAPNGFPSLTTLSLQGAFCLTDIALLLISSSSPLLQFI
NLTECSLLTFRALKILADKFGSTLRGLSIGGCQGIKWYKGFSSSLYKFEKLNYLSVAGLD
SVNDGVVRTFFMFRSSNLTDLSLANCNEVTDDCIWHIGRYCKKLEALDITDLDKLTDKAL
EFITEGCKYLRSLKLTSNGFSDEGIAACLEVSGGSLNELCLNKVRNVGPHTAFSLAEACK
RLQFLDLSWCRRLTQEDLRRILRCCSSLRSLKLFGWTQVDDTFLEELSRSHVHITGLKMT
SLYAHLDNFYPSVGAKFF
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgaattcttccgatattcccaatgattctcgaggaaatcgtcggatcacatccgatgaa
gaagccatcgaagcacttctcatggcagcgaacgaggttgagaatcgtgatttaccatta
gggtttcaaaatcacgacgtggagatggaggaaagaaaaagcaccgatttggatgatgaa
gatgaagcttatttagcaaattggcagaaacaatgggctgaagaacaagctgcaagaaaa
agaagacatgattatgaagtttcgagaaattataaagttgcgagaacttttgctcttgat
ttgcattctgatctcaagattgttgaaaaaacagaggaagaagaagaagtaataagagat
gaagaaaaaagtgagtttcagagagctaaagaatcgatcaagaagagaagagaagagatc
tctacaacaagtgatatggagatagatccgatgacggtactaaggaaagctcctactctt
gtggagctgagtgcgagagttcttgctcagaatattgtagctatcaagtcattgaaactt
gttcctgatcatttgaggaagaaactctcgtatcttgttagtggtttaggcaaagtcgat
acacgtcttatggagcttttgattgaggattctccgaatgagatttgcgcgaagaactgt
gtcgaattagaggaggatgacttgattaagatcctctgtgactgtgacagagttagcttg
aaggtgttgattcttgatctttgcggaagatccattacggattacacgataagggagttc
tttaaacgcgctcctaacggattcccgtcattaactacgctatctcttcaaggagcgttc
tgtttaacagacattgcattgttgttgatatcgagttcatctcctctgcttcagtttatt
aacctcactgaatgctctcttctcactttccgcgctttgaagattcttgctgataagttt
ggttccactcttagagggcttagcattggtggatgccaagggattaaatggtataaaggc
tttagtagcagcctatataagttcgagaaattgaactatctttcggttgcaggactcgat
agtgttaatgatggtgttgtcagaacgttctttatgttccgtagctcaaatctcactgat
ctatctctcgctaattgcaatgaggttactgatgattgcatttggcatattgggaggtat
tgtaaaaagctagaagctcttgacatcacagacttggataaattgactgataaggcatta
gagtttattacagagggttgcaaatatttgagatcactcaaacttacaagtaacggattt
agtgacgaaggtattgccgcgtgtcttgaagtctcgggaggttctcttaacgaactttgc
ctaaacaaagtccgaaatgtcggtccacatactgccttttcgcttgctgaagcttgcaag
aggttacaatttttggacctctcgtggtgtcgaagactcacccaagaggacctaagacga
attttgagatgctgctcgtcacttagatcactcaagctatttggatggacacaggtggat
gatacatttcttgaagaactttcaagatcacacgttcatatcaccggattgaaaatgact
tcactctacgctcaccttgataacttttacccaagtgtaggtgccaagttcttctga

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