Arabidopsis lyrata (lyrate rockcress): 9308046
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Entry
9308046 CDS
T01578
Name
(RefSeq) F-box/LRR-repeat protein 20
KO
K15082
DNA repair protein RAD7
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9308046
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
9308046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
9308046
NCBI-ProteinID:
XP_020879124
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MNSSDIPNDSRGNRRITSDEEAIEALLMAANEVENRDLPLGFQNHDVEMEERKSTDLDDE
DEAYLANWQKQWAEEQAARKRRHDYEVSRNYKVARTFALDLHSDLKIVEKTEEEEEVIRD
EEKSEFQRAKESIKKRREEISTTSDMEIDPMTVLRKAPTLVELSARVLAQNIVAIKSLKL
VPDHLRKKLSYLVSGLGKVDTRLMELLIEDSPNEICAKNCVELEEDDLIKILCDCDRVSL
KVLILDLCGRSITDYTIREFFKRAPNGFPSLTTLSLQGAFCLTDIALLLISSSSPLLQFI
NLTECSLLTFRALKILADKFGSTLRGLSIGGCQGIKWYKGFSSSLYKFEKLNYLSVAGLD
SVNDGVVRTFFMFRSSNLTDLSLANCNEVTDDCIWHIGRYCKKLEALDITDLDKLTDKAL
EFITEGCKYLRSLKLTSNGFSDEGIAACLEVSGGSLNELCLNKVRNVGPHTAFSLAEACK
RLQFLDLSWCRRLTQEDLRRILRCCSSLRSLKLFGWTQVDDTFLEELSRSHVHITGLKMT
SLYAHLDNFYPSVGAKFF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttccgatattcccaatgattctcgaggaaatcgtcggatcacatccgatgaa
gaagccatcgaagcacttctcatggcagcgaacgaggttgagaatcgtgatttaccatta
gggtttcaaaatcacgacgtggagatggaggaaagaaaaagcaccgatttggatgatgaa
gatgaagcttatttagcaaattggcagaaacaatgggctgaagaacaagctgcaagaaaa
agaagacatgattatgaagtttcgagaaattataaagttgcgagaacttttgctcttgat
ttgcattctgatctcaagattgttgaaaaaacagaggaagaagaagaagtaataagagat
gaagaaaaaagtgagtttcagagagctaaagaatcgatcaagaagagaagagaagagatc
tctacaacaagtgatatggagatagatccgatgacggtactaaggaaagctcctactctt
gtggagctgagtgcgagagttcttgctcagaatattgtagctatcaagtcattgaaactt
gttcctgatcatttgaggaagaaactctcgtatcttgttagtggtttaggcaaagtcgat
acacgtcttatggagcttttgattgaggattctccgaatgagatttgcgcgaagaactgt
gtcgaattagaggaggatgacttgattaagatcctctgtgactgtgacagagttagcttg
aaggtgttgattcttgatctttgcggaagatccattacggattacacgataagggagttc
tttaaacgcgctcctaacggattcccgtcattaactacgctatctcttcaaggagcgttc
tgtttaacagacattgcattgttgttgatatcgagttcatctcctctgcttcagtttatt
aacctcactgaatgctctcttctcactttccgcgctttgaagattcttgctgataagttt
ggttccactcttagagggcttagcattggtggatgccaagggattaaatggtataaaggc
tttagtagcagcctatataagttcgagaaattgaactatctttcggttgcaggactcgat
agtgttaatgatggtgttgtcagaacgttctttatgttccgtagctcaaatctcactgat
ctatctctcgctaattgcaatgaggttactgatgattgcatttggcatattgggaggtat
tgtaaaaagctagaagctcttgacatcacagacttggataaattgactgataaggcatta
gagtttattacagagggttgcaaatatttgagatcactcaaacttacaagtaacggattt
agtgacgaaggtattgccgcgtgtcttgaagtctcgggaggttctcttaacgaactttgc
ctaaacaaagtccgaaatgtcggtccacatactgccttttcgcttgctgaagcttgcaag
aggttacaatttttggacctctcgtggtgtcgaagactcacccaagaggacctaagacga
attttgagatgctgctcgtcacttagatcactcaagctatttggatggacacaggtggat
gatacatttcttgaagaactttcaagatcacacgttcatatcaccggattgaaaatgact
tcactctacgctcaccttgataacttttacccaagtgtaggtgccaagttcttctga
DBGET
integrated database retrieval system