Arabidopsis lyrata (lyrate rockcress): 9308052
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Entry
9308052 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9308052
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9308052
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9308052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
zf-Nse
Motif
Other DBs
NCBI-GeneID:
9308052
NCBI-ProteinID:
XP_020877825
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MEGAGDTTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCI
LEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPARNATIFRHPTLGDFELQH
LPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHPQFMVFSSHPNASSP
PPHPPMPSSPSQRGESDTVSNLPHNTLGEGSHQSNTQPPTSSHPRQVSPSASDSNSRPVN
QSSPSDQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFSRNTSMADLGS
EVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPESNNEHNNRSEAGDEHSM
NERGVKETCATGSGSS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcgggagatacgacgacgtcggaggggcatttgacttcggcagcagctttt
gttgaagggggaattcaagatgcttgtgatgatgcttgtagcatttgtcttgaatccttc
tgcgaaagcgatccatccactttgactagttgcaagcatgagtatcatcttcaatgcatt
cttgaatggtgtcaaaggagctcacagtgcccaatgtgttggcaatctattagtctcaaa
gaccccacaagtcaggagttgcttgaggctgttgaacaggagaggaatttccgcttcaat
ccagctagaaatgccaccatatttcgtcaccccactcttggtgattttgaattacaacat
ctgccagtgggggtggataatgcagagattgaagaacgaatcattcagcacttggctgct
gctgctgctatgggacgagcaagacatggggtaagaagggaaggccacagaagcaggtcg
tcaagtcaaggacatccacagtttatggtgttctcttcacatcctaatgcttcttctcct
ccacctcatcctcccatgccttcttctccatctcagagaggtgagagtgacacagtctca
aaccttcctcacaataccttaggggagggttctcatcagtcaaacacgcagccaccaact
tcttctcatccccgccaggtttctccttcggcatctgattcaaacagcaggcctgttaat
caatcttccccaagtgatcaagatagagctggaccatcagaactccagtcattttcggaa
tcactaaagtctcgattaaacgctgtctccacgagatacaaagaatcgatatcaaagaat
acaagaaactggaaagatagacttttttctcgcaacacttccatggctgatcttggctct
gaggttaaaagagaggtcagcgccggaatcgccactgtgtcccgcatgatggaacgtcta
gaaacgagagaaaacagtagacccagcactgcatctgtatcagatgtctctgaaaatcac
actcctgaatcaaacaatgagcataataatagatcagaagcgggtgatgaacattctatg
aatgaaagaggtgttaaagaaacatgtgcgactggttctggttcaagctaa
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