Arabidopsis lyrata (lyrate rockcress): 9308086
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Entry
9308086 CDS
T01578
Name
(RefSeq) AP-2 complex subunit alpha-1 isoform X1
KO
K11824
AP-2 complex subunit alpha
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04142
Lysosome biogenesis
aly04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
9308086
04142 Lysosome biogenesis
9308086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9308086
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9308086
Membrane trafficking [BR:
aly04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
9308086
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
9308086
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptin_C
Alpha_adaptinC2
Cnd1
RRN3
Motif
Other DBs
NCBI-GeneID:
9308086
NCBI-ProteinID:
XP_020877258
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MTGMRGLSVFISDVRNCQNKEAERLRVDKELGNIRTCFKNDKVLTPYKKKKYVWKMLYIH
MLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAINTVRNDIIGRNET
FQCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVD
GWADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKILERLARNQDVPQEY
TYYGIPSPWLQVKAMRALQYFPTIEDPSTRKALFEVLQRILMGTDVVKNVNKNNASHAVL
FEALSLVMHLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQ
SQIVTSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELSLKAAIL
AEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQVYKIIRINILFILFM
TFESAYKSSLIRQPYAASKAREYLDKIAIHETMVKVSAYILGEYGHLLARQPGCSASELF
SILHEKLPTVSTPTIPILLSTYAKLLMHTQPPDPELQKKIWAVFHKYESCIDVEIQQRAV
EYFELSKKGPAFMDVLAEMPKFPERQSSLIKKAENVEDTADQSAIKLRAQQQPSNALVLA
DPQPVNGAPPPLKVPIVTGSTQEPQSVARSLSHPNGTLSNIDPQTPSPDLLSDLLGPLAI
EAPPGAVSNEQHGPIGAEGVPDEVDGSAIVPVEEQPNTVELIGNIAERFHALCLKDSGVL
YEDPHIQIGIKAEWRGHHGRLVLFMGNKNTSPLTSVQALILPPAHLRLDLSPVPDTIPPR
AQVQSPLEVMNIRPSRDVAVLDFSYKFGASVVSAKLRIPATLNKFLQPLQLTSEEFFPQW
RALSGPPLKLQEVVRGVRPLALPEMASLFNSFHVTICPGLDPNPNNLVASTTFYSESTGA
MLCLARIETDPADRTQLRMTVGSGDPTLTFELKEFIKEQLITIPMGSRALVPAASSAPSP
APPVAQPPSPAALADDPGAMLAGLL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaatgagaggtctctccgtatttatcagcgacgttcgtaattgccagaacaag
gaagcggagagactccgagttgataaggagcttggaaacatacgtacatgcttcaagaat
gacaaggttttgacaccatataaaaagaagaaatatgtctggaaaatgctttatatacat
atgctaggctacgatgtggattttggccatatggaggcggtttctcttatatctgcgcca
aagtatccagaaaagcaggttggctacattgttacatcttgcttgctcaatgagaaccat
gactttttgaagttggcaataaatacagtgcggaacgatattattggtcggaatgagact
ttccaatgcctagcactgaccttggttggaaatattggtggaagagattttgctgaatca
ttggcacctgatgttcaaaagctacttatttctagtagttgcagacctctcgtaaggaaa
aaagcggcactgtgcctactgcgcttattccgaaaaaatccggatgccgtcaacgttgat
ggctgggcggatcgtatggcacaacttttggatgaacgagatcttggtgtcttgacgtct
tctacgagtcttcttgtagctctggtatctaataatcatgaggcgtactcaagttgtcta
cctaaatgtgtcaaaatattagaacgccttgctaggaaccaggatgttcctcaggagtac
acatactatggcatcccttctccttggctccaggttaaggcaatgagggctcttcaatat
tttccaaccattgaagatcccagtaccagaaaagctctctttgaggtccttcagcgaata
ttgatggggacagatgttgtgaaaaatgtgaataaaaacaatgcgtctcatgctgtgttg
tttgaagctctatccctggtcatgcatcttgatgctgagaaggaaatgatgtcacagtgt
gttgctctgcttggcaagtttatttctgtccgtgagcccaacatcagatatctgggcttg
gaaaatatgacacgaatgctgatggtcacagatgttcaagatatcataaagaagcatcag
tctcagatagtcacctccttgaaagaccctgacatcagtattcgtagacgtgctcttgat
ttgctatatgggatgtgcgatgtgtcaaatgcaaaggatatagtcgaagagttgttgcag
tatcttagcacagcggaattttccatgcgggaggaattatcacttaaagctgcaattctt
gctgagaagtttgctcctgatctatcatggtatgtagatgtgatccttcagttaatcgac
aaggctggggattttgttagcgacgacatttggtttcgtgtggttcagtttgtaacaaat
aatgaagacctccaggtttataaaattattaggataaatatattgtttatcctattcatg
acattcgaaagtgcttacaaaagttctttgatccgacagccttatgccgcatcaaaagca
agagaatatttggacaaaattgcaatacatgagaccatggtgaaggtcagtgcttatatt
ttgggggagtatggtcaccttctagctcgacaacctggatgcagtgcaagtgaactcttt
agcatcttacatgagaagcttcccacagtatcgactcccaccattcctatacttctttcc
acatatgcaaagcttcttatgcacactcaacccccggatccagaactgcaaaaaaaaatt
tgggctgtatttcataagtatgagagttgtattgatgtggagatacaacagagggcagtt
gaatattttgaattgagtaaaaaagggcctgcctttatggatgtattggctgagatgcca
aaatttccggagcgccagtcttcattgataaaaaaggcagaaaacgtggaagataccgca
gaccagagtgccatcaagcttagagcacaacaacagccttcaaatgctttggttttggct
gacccacagcctgttaatggggcacccccacctttgaaggttccaattgtaactggaagc
acgcaggaaccccagtcagtggctcgatctctctctcatcctaatggaactttaagtaat
atagatccacaaactccatcacctgatctccttagtgacctgctcggtcctcttgcaata
gaggctcctcctggagctgtctcaaatgaacaacatggtcccataggggcagaaggagta
ccagatgaagttgatggttctgccattgtacctgttgaagagcaaccaaatacagtggag
cttatcggaaatattgccgagagatttcatgctttatgtttgaaagacagtggtgtctta
tacgaggatcctcatatccagattggcatcaaagctgaatggagagggcatcatgggaga
cttgttctcttcatgggaaacaagaatacttctccacttacatcagttcaagctctgata
ctaccccctgcccatttaagactggatctgtctccagtacctgatacgattcctcctcga
gcacaggtgcaatctccacttgaagtgatgaacatccgccctagtagggatgttgcggtt
ttggatttttcctacaagtttggtgccagcgtggtcagtgccaaattacggatcccggca
accttgaacaagtttcttcaaccgctacaattgacatctgaagaattcttccctcaatgg
agagcactttcagggccacccttgaaacttcaggaagttgttagaggtgtaagacctcta
gctcttccggaaatggcaagtctgttcaacagttttcatgtgacgatatgccctgggctt
gatccaaatcctaataatctagtggcaagcacaaccttctactctgaaagtacaggagcc
atgctctgtttggcaagaattgaaacagacccagcagacagaacccaactgcgaatgaca
gtagggtcgggagatcctacccttacatttgagttaaaagaattcatcaaggaacaacta
attactatcccaatgggatctcgagctctagttccagcagcaagttcagcaccatcacca
gcaccacctgtagctcaacctcctagcccagcggctttagctgatgatccaggagctatg
cttgccggcttactttaa
DBGET
integrated database retrieval system
