Arabidopsis lyrata (lyrate rockcress): 9308122
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Entry
9308122 CDS
T01578
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9308122
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
9308122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
LRR_RPS2
F-box_5
LRR_At1g61320_AtMIF1
LRR_14
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
9308122
NCBI-ProteinID:
XP_002872053
UniProt:
D7M1Q8
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MSSVCVNEALTDDELRWVLSRLDSDKDKEVFGLVCKRWLNLQSTDRKKLAARAGPHMLGR
LASRFTQIVELDLSQSISRSFYPGVTDSDLAVISEGFKCLRVLNLHNCKGITDTGLASIG
RCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEA
LGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSLAKACASSLKTLKLLDCY
KVGNESILSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSL
SCILKQCRNLEALDIGCCEEVTDTAFRELGSDDVLGLKVLKVSNCTKITVTGIGKILDKC
SSLEYLDVRSLPHVTEVRCSEAGLEFPTCCKVNFSGSLTEPDVLL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggtctgtgttaacgaagcattaaccgatgacgagctgagatgggtattgtcg
agactagacagtgacaaggacaaggaagtgtttggtttggtctgcaagaggtggctaaat
ctgcagagcaccgaccggaagaagctagcggcgcgtgctggtccacatatgctcggccgt
ctcgcttctaggttcactcaaatcgtcgaattggatttgtctcagtcaatttctaggtca
ttttatccaggtgttactgattctgacctcgctgttatctctgagggtttcaagtgtctc
agagttcttaatcttcacaactgtaaaggtattacagatactggtttggcctcaattgga
aggtgtctttctttactgcagtttttggatgtatcctattgtagaaagctctcagataaa
ggattatcagctgttgcagaaggctgccatgatctaagggcattgcatctagcgggttgt
cgtttcatcactgatgaatcgctgaaatcactctctgagagatgccgtgatcttgaagct
ctcgggctacaaggctgcaccaatatcactgattcaggccttgctgatcttgtgaaggga
tgcaggaagataaaatctttggacattaataaatgtagcaatgtgggagatgctggagtt
tccagcttggccaaagcttgtgcatcttccctcaagacgctcaaattgctggactgttac
aaagttgggaacgaatctatattgtccctggcacagttttgcaagaatctggaaactctg
ataatcggtggatgcagagacatctctgacgaatctatcatgttactggcagattcctgc
aaagacagtctcaagaatttgaggatggattggtgcttgaatatatctgactcttccctt
agctgcattctgaagcagtgcaggaacttggaggctctagatatcggttgctgtgaagag
gtcacagacactgctttccgagaattagggagcgacgatgttttgggattgaaggtttta
aaggtgagcaactgcacaaagatcacagtaacagggataggcaagattttggacaaatgc
agttccttggagtatctagatgtaaggtctcttccacatgtgacagaagtgagatgcagt
gaagctggtttggagttccccacatgttgtaaagttaacttttcgggaagtttaaccgag
ccagatgttctgctttga
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