Arabidopsis lyrata (lyrate rockcress): 9308228
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Entry
9308228 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: EIN3-binding F-box protein 2
KO
K14515
EIN3-binding F-box protein
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04016
MAPK signaling pathway - plant
aly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
9308228
04075 Plant hormone signal transduction
9308228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9308228
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
9308228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
9308228
NCBI-ProteinID:
XP_020876848
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MSGIFRFSGDEDFFLGGSSMYLSPGSCPGVYFPARKRLRIAAPSVFSGFEEKQTSIDVLP
DECLFEILRRLPSGEERSACACVSKHWLNLLSSISRSEVNESVQDVEGEGFLSRRLEGKK
ATDLRLAAIAVGTSSRGGLGKLQIRGSGFDSKVTDAGLGAVAHGCPSLRVLSLWNLPAVS
DMGLSEISRSCPMIEKLDLSRCPGITDNGLVAIAENCVNLSDLTIDSCSGVGNEGLRAIA
RRCINLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNISGLSLAVIGHYGAAVTD
LVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDIGLEAVGNGCPDLKHVSLNKC
LLVSGKGLVALAKSALSLESLKLEECHRINQVGLMGFLMNCGSKLKAFSLANCLGISDFN
LESPLSSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVRELLQ
SNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNLDGCKNITDTSLVAVAKNCYSVN
DLDISNTLVSDHGIKALASSPNHLNLQVLSVGGCSAITDKSKACIQKLGRTLLGLNIQRC
GRISSSTVDTLIENLWRCDILY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaatcttcagatttagtggtgatgaagatttttttcttgggggatcatcgatg
tatctatcgccagggagctgtcccggcgtgtatttcccagcaaggaagaggttacgtatc
gctgcgccgtcggttttcagcggttttgaggagaagcaaacatcgatagatgtattgccg
gatgagtgtttatttgagattctcagacgtttaccttctggagaagagaggagtgcgtgc
gcttgtgtttccaagcattggcttaatcttttgagtagtatcagtaggagtgaagtgaat
gagtcagttcaagatgttgagggtgaagggtttttgtcaagaagattagagggtaagaag
gcgacggatttgaggttggcagcgattgcggttgggacatcgagtcgaggaggattgggg
aagcttcagattcgtgggagtggttttgatagtaaagtgactgatgctggtcttggggct
gttgctcatggttgtccatctcttagggttctttctctatggaacttgcctgctgttagt
gatatgggtttgtctgagatatctcggtcatgcccgatgattgaaaaacttgacctttcg
cgatgtccaggaataactgacaatggtttggttgcaattgctgagaattgcgtgaatctg
agtgatctgacgattgattcgtgctctggtgttgggaatgagggtttaagggctattgct
agacgttgtatcaatctgagatctatctctatcaggagctgcccacgtattggagatcaa
ggtgttgccttcctcttggcccaagctggttcttacttgacgaaagtgaaactccagatg
ctgaacatatctggtctgtctcttgctgttattggtcactatggagcagctgttactgat
cttgtgcttcatggccttcaaggtgtgaacgagaaaggcttttgggttatgggaaatgca
aaagggctgaagaaactgaagtcactttcagtgatgtcgtgccgaggcatgactgatatt
gggcttgaagctgttggaaatggttgccctgatctgaagcatgtctctctgaacaaatgc
ttgcttgtttctggtaaaggacttgtcgctttggccaaatctgcattgtcactggaaagt
ttgaaacttgaagaatgccacaggatcaaccaggttggtcttatgggttttctcatgaac
tgtggctcaaagttgaaagctttctctttggcaaactgtctgggcatcagtgacttcaac
ttagaatcacctctgtcatcacccagttgcagctctttacgttctttgtcgatccgatgc
tgccctgggtttggggatgcaagtctcgctttcttgggaaagttctgtcatcagcttcag
gatgttgaactctgtggactgaatggagtgacggatgcaggtgtgcgcgagttgcttcag
agcaacaatgttggtctagtgaaggtgaacttgagcgaatgcatcaacgtttcagacaac
acagtctctgcaatttctgtttgccacggacgcacattggagtctcttaaccttgacggc
tgcaagaacatcactgacacaagccttgtcgcagtagccaagaactgctactcagtcaat
gaccttgacatctcaaatactttggtctcagatcatggaatcaaggctttggcatcttct
cccaaccatctgaatcttcaggttctttctgttggtggctgctcagcgattacagacaaa
agcaaggcatgcatacaaaaactaggccgcacgcttttgggattaaacatccaacgttgt
ggcagaatcagcagcagcactgtggatactcttatcgaaaatctatggaggtgcgatata
ctctactaa
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