Arabidopsis lyrata (lyrate rockcress): 9308333
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Entry
9308333 CDS
T01578
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9308333
03012 Translation factors [BR:
aly03012
]
9308333
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
9308333
Translation factors [BR:
aly03012
]
Eukaryotic type
Initiation factors
eIF-3
9308333
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_Aladin
Tricorn_2nd
RRM_1
Beta-prop_ELP1_1st
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
9308333
NCBI-ProteinID:
XP_020876888
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MEVVDIDARAAKLGINWSQVNFDSIQLPPGEDFGIESDDEAVYHDDQSEFDTGFGNIIVV
DHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQEAQN
AKEKSHGYKLDKSHIFAVNMFDDFDRLMNVREEWEPPQARPYVPGENLQKWLTDDKARDQ
LVIRSGPDTEVYWNDARQKKPEPVHKRPYWTESYVQWSPLGTYLVTLHKQGAAVWGGADT
FTRLMRYQHSMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKGS
ADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDNV
VDICWSPTDSILSLFVPEQGGGNQPAKVALVQIPSKVELRQKNLFSVSDCKMYWQSSGEY
LAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHG
DQPRPDVSFYSMKTTQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFFN
VDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFTIWSFNGIVIYRILKDHFF
QLAWRPRPPSFLTAEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQDREKRKALKDEWEKW
VMQWKALHEEEKLARQNLRDGEVSDVEEDEYEAKEVEFEDLIDVTEEIVQESM
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgttgatattgatgctcgagcagctaagttagggattaattggtctcaggtt
aattttgattccatccaacttcctcctggagaagactttgggattgagagtgatgatgaa
gctgtttaccacgatgaccagtcagaattcgacactggattcggtaacattatcgtggtt
gatcacctccctgttgttcccaaggagaagtttgagaaacttgaaggtgttgtcaagaaa
atttacaaccagttaggtgtgatcaaggaaaatggactgtggatgcccgttgatcccgac
accaagatgacattgggctactgttttattgagttcaatactcctcaggaagcacaaaac
gctaaggaaaagtctcatggctacaagttggacaagtctcacatctttgctgtaaacatg
ttcgatgatttcgacaggttgatgaatgtgcgggaggagtgggagcctcctcaggccagg
ccgtatgtccctggggaaaatttacaaaagtggcttactgatgacaaagcccgggaccag
ctagttattcgttctggccctgatactgaagtttactggaatgatgctaggcagaagaag
cctgaacctgttcataagcgtccttattggacagagagttatgtgcagtggtctccttta
ggtacataccttgtgacacttcacaagcagggggcagctgtttggggtggtgctgataca
ttcacacgtctcatgcgttatcagcattctatggttaaactagttgatttctcaccaggt
gagaaatatctggtaacttaccacagccaagaaccaagcaacccgcgggatgcaagtaaa
gtagagattaaggtttttgatgtgagaactgggaggatgatgagagatttcaagggtagt
gctgatgagttttcaattggaggacctggtggtgttgctggtgcctcttggcctgttttc
agatgggctggtggaaaagatgataaatactttgccaagcttagcaaaaacactatctcc
gtctatgagactgagactttcagcctaatagacaagaaatccatgaaggttgataatgtt
gtggatatctgctggtctcctactgattccatcctttcattgtttgttcctgaacaaggt
ggtggaaaccaacctgccaaggtcgctctagtccaaatcccgagcaaggtggagctgagg
cagaagaatctcttcagtgtgagcgactgcaagatgtactggcagagtagtggagagtat
cttgctgtcaaggttgatcggtacacgaaaactaagaagagcacatactctggatttgag
cttttccgtatcaaagaaagggatattcccatcgaggttcttgagctggacaacaagaac
gacaagatcattgctttcgcgtgggagcccaagggtcacaggtttgctgtgattcatggt
gaccaaccaagaccagacgtcagtttctactcaatgaagaccacacaaaacactggaagg
gtttcaaagctcgcaactttgaaggccaaacaagctaatgccctcttctggtcgcccaca
ggcaagtacataattcttgctgggttaaaaggtttcaatggccagcttgagtttttcaac
gtggatgagctcgagacaatggccacagctgaacacttcatggccactgatatcgaatgg
gacccgactggaaggtacgtagcaaccgcggtgacatcagtccacgagatggagaatggg
ttcaccatatggtctttcaacgggattgtgatttaccggatactgaaggatcatttcttc
cagttggcctggcgtccaagaccgccatcattcttgactgcagagaaggaagaagagata
gcaaagaacctgaagaagtacagcaagaagtatgaggcagaggatcaggacgtgtcgttg
ctgttgagtgaacaagacagagagaagaggaaggcattaaaggacgaatgggagaaatgg
gtgatgcagtggaaggctctgcatgaagaggagaaactcgcgaggcaaaatcttcgggat
ggtgaagttagtgatgtggaagaagatgagtatgaagccaaagaagttgagtttgaggat
cttattgatgtcactgaggaaatcgttcaggagtcgatgtaa
DBGET
integrated database retrieval system
