Arabidopsis lyrata (lyrate rockcress): 9308335
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Entry
9308335 CDS
T01578
Name
(RefSeq) long chain acyl-CoA synthetase 7, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00061
Fatty acid biosynthesis
aly00071
Fatty acid degradation
aly01100
Metabolic pathways
aly01212
Fatty acid metabolism
aly04146
Peroxisome
Module
aly_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
9308335
00071 Fatty acid degradation
9308335
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
9308335
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
aly01004
]
9308335
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9308335
Enzymes [BR:
aly01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
9308335
Lipid biosynthesis proteins [BR:
aly01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
9308335
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of breast milk
9308335
Exosomal proteins of breast cancer cells
9308335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
9308335
NCBI-ProteinID:
XP_020876891
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MKFASPAQRRLETIRSHLYTSPADDQSSLFLNATASSASPFLNKDGYSVVLPEKPDNGKW
NVYRSAKSPTKLVSRFQDHPEIGTLHDNFVYAVETYPENKYLGTRVRSDGTIGEYSWMTY
AETASERQAIGSGLLFHGINQGACVGLYFINRPEWLVVDHACAAYSFISVPLYDTLGPDA
VKFVVNHATLQAIFCVPQTLNILLSFLAEIPSIRLIVVVGGADEHLPSLPQGSGVNIVSY
QKLLSQGRSTLHPFSPPKPEDIATICYTSGTTGTPKGVVLTHGNLIANVAGSSVEAEFLP
SDTYISYLPLAHIYERANQIMAVYGGVTVGFYQGDVLKLMDDFAVLRPTIFCSVPRLYNR
IYDGITSAVKSSGVIKQRLFQVAYNSKKQAIINGRNPSAFWDKLVFNKIKEKLGGRVRFM
GSGASPLSPDVMDFLRVCFGCSVREGYGMTETSCVISAMDDGDNLSGHVGSPNPACEVKL
VDVPEMNYTSDDQPYPRGEICVRGPIIFKGYYKDEEQTREILDGDGWLHTGDIGLWLPGG
RLKIIDRKKNIFKLAQGEYIAPEKIENVYTKCRFVSQCFIHGDSFNSSLVAIVSVDPDVM
KDWAASEGIKYEHLGQLCNDPRVRKAVLAEMDDLGKEAQLRGFEFAKAVTLVPEPFTLEN
GLLTPTFKIKRPQAKAYFAEAIAKMYAEIAASNPMPSKL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgcttcgccggcacaacgtcgtctcgaaaccattcgatctcacctctatact
tctccggccgacgatcaatcatctctcttcctcaacgccaccgcttcttctgcttcacct
ttcttaaacaaggatggctacagtgttgtgcttccagagaagcctgataatggaaaatgg
aatgtctacagatctgcaaagtcgccgacgaaactcgttagcaggttccaggatcatcct
gaaatcgggactttacatgacaattttgtatatgctgttgaaacgtatcctgaaaacaag
tatcttggtacacgagttcggtccgatggaaccattggagagtactcatggatgacatat
gcagaaacagcttctgaacgacaagctattggttcaggactcctgtttcatggaattaac
caaggagcttgtgttggactctattttattaacagaccagagtggttggttgtggatcat
gcttgtgcagcatattcatttatctctgttcctttatacgatacacttggtccagacgct
gttaagttcgtggtgaatcatgctactctgcaggctatattttgtgtaccacaaaccttg
aatattttgctaagcttcctagcggaaatcccatccattcgtctcattgtggtggtggga
ggggcggacgagcatttgccatcacttcctcaaggatctggagtcaatattgtatcatac
caaaagcttttgagtcagggtcgaagtaccttacatccattttcccctccaaaacccgaa
gacattgcaaccatatgctacacaagtggaaccacaggaacaccaaagggtgttgtgttg
actcatggaaacttgattgcaaatgttgccggttccagtgtagaagcagaattcttacct
tcagatacttacatatcatatcttcctttggcgcacatatatgaacgtgcaaatcagatt
atggcggtgtacggtggtgttactgttggtttctatcagggggatgtcctgaagctgatg
gatgattttgctgtgttaaggccaacaatattctgtagtgtcccccgcttatataatcga
atatatgatggaatcacaagtgccgtaaaatcatctggggttattaaacaaaggctgttt
caagttgcctataactcaaagaagcaagcgatcataaatggacggaatccttctgcattt
tgggacaaactggtcttcaacaaaataaaagaaaagcttggaggacgggttcgctttatg
gggtcaggtgcttctccattgtcacccgatgtcatggatttcttgagagtatgctttgga
tgttcggtgcgtgaagggtatggtatgacagagacttcttgtgtcataagcgctatggat
gatggtgacaatttatctggtcatgtcggatcccctaatccagcgtgtgaggtaaaactt
gtggatgttcccgaaatgaattacacatcagatgatcaaccatacccacgtggggaaatc
tgtgtaagaggaccaatcatcttcaaaggctactacaaagatgaagaacaaacgagagaa
attcttgatggagatggctggctacacacaggagatatcgggttgtggttacctggcggt
cggctcaagatcatagacaggaagaagaacatatttaaattggcgcaaggagaatatata
gcaccagagaaaatcgaaaatgtttataccaaatgcagatttgtttcgcagtgtttcata
cacggtgatagcttcaattcctctctagtagctatagtttcagtagacccagatgttatg
aaagattgggctgcatcagaaggcatcaagtatgagcatctaggacagctctgtaacgat
ccaagagtgcgaaaggctgttcttgctgagatggatgaccttggaaaagaagctcagttg
agaggatttgagtttgctaaggctgtgactttggtgccagaaccattcaccttagagaat
ggacttttgacaccaacattcaagataaagagacctcaagcaaaagcttactttgcagaa
gcaatagccaaaatgtatgcggaaatcgcagcctcgaaccccatgccttctaaactgtga
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