Arabidopsis lyrata (lyrate rockcress): 9308379
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Entry
9308379 CDS
T01578
Name
(RefSeq) mRNA-capping enzyme
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9308379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9308379
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
9308379
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
9308379
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
9308379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
DNA_ligase_A_M
Tc-R-P
PTP-SAK
Y_phosphatase
PTP-NADK
Y_phosphatase3
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
9308379
NCBI-ProteinID:
XP_002872310
UniProt:
D7M6U0
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MIATKRHLEDRIETYEEQSKRLRQTSFRDQNVTIPQGWLDCPRFGQDIGFIIPSKVPLSE
SYNDCVPSGKRYNFKEWFTSGRTRLGLVIDLTNTTRYYHPNTELRHNGIKYVKIRCSGRD
AVPDNVSVNTFVYEVNQFENNFSQKYVLVHCTHGHNRTGFMIVHYLMRSRPMMSVTEALK
MFSDARPPGIYKPDYIDALYSFYHEVKPESVICPPTPEWKRSEEVKVDDDDDALSYPVVQ
GNNQEENVKKLSNDDILGDDIPYGQEVSYQQLINDMLNISMQFPGSHPVSLGREALQLLR
QRYYYATWKADGTRYMMLLTRDGCYLVNREFRFRRVQMRFPCKYDPSDYKVHHYTLLDGE
MVIDTFEVGGRRCQARRYLVYDLVAINGQSVAERPFSERWNILEREVIRPRNDEKKVMNH
WYRYEMEPFGVRIKPFCLLSAVEKIPSLSHETDGLIFQGWDDPYVFGTDHGLLKWKFVET
LDFLFDMDKYGRQMLFLQERGKMKLMEGYSVEFRGDGWDNNPASYCGKIVECSWDKEKKV
WVSLRIRVDKSKPNGIGTGHSVIKCIKDDITKDVLLEEIKKITRLPMYVDRIRRDTQEAE
RRKHGNRKG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgattgctacgaagagacatctcgaagaccgaatcgaaacttatgaagaacagagcaaa
agattgagacaaacaagtttccgtgatcagaacgtaaccatccctcaaggttggttagat
tgtcctcgctttggtcaagatattggattcatcattccttcaaaagttcctctcagtgaa
tcgtacaatgattgtgttccttctggcaaaagatacaatttcaaagagtggttcactagt
ggaaggacgaggcttggtcttgtgattgatcttaccaatacaactcgttactatcatcct
aacaccgagttaagacataacggtatcaagtatgttaagattcgttgcagtggtcgtgat
gctgtgccggataatgtgtcggtaaacacatttgtttacgaggttaatcagttcgagaat
aacttctcacagaagtatgttcttgtgcattgtactcacggacataatcgtacagggttt
atgattgttcattaccttatgcggtctagaccgatgatgagtgttacagaagccttgaaa
atgttttccgatgctcgcccgcctgggatctataaacccgattacattgatgctctatac
agtttttatcatgaagttaaacctgagagtgttatatgtccaccaactcctgaatggaag
aggtctgaagaagttaaagtcgacgatgatgatgatgctctgtcttaccctgtagtgcaa
ggaaacaatcaggaggagaatgtgaagaagttgtcgaatgatgatattttgggggatgac
ataccctatggtcaagaggtttcttaccagcaattaattaatgatatgctgaatatttct
atgcagttccctggctcgcaccctgtatctttaggcagggaggcattgcaactcttgagg
cagcggtactattacgcgacatggaaggcagatggaacgcggtatatgatgctcttgact
agagatgggtgttatctggttaatagagagtttagatttagaagggtacaaatgcggttc
ccttgtaagtacgacccgagtgattataaagtgcatcattacacattgcttgatggagag
atggttatagacacatttgaggtgggaggaaggcggtgtcaggcgaggaggtacctcgtg
tatgatttggtagcgattaacgggcaatcagtggcagagcggccttttagtgaaagatgg
aatattcttgagagagaggtgatcagaccgcgtaacgatgagaagaaggttatgaatcat
tggtatagatacgagatggagccttttggggtacggatcaagcctttttgtttactctct
gctgtggagaagattccatcgctttcgcatgaaacagacggtctaatatttcaagggtgg
gacgatccttatgttttcggaacggaccacggtctattgaaatggaagtttgtggaaaca
cttgattttctgtttgacatggacaagtatgggcgtcaaatgctcttcttgcaagaacgt
gggaagatgaagcttatggaaggctattccgttgaatttagaggtgatggttgggacaat
aacccggccagttactgtggaaagattgtagagtgttcatgggataaggagaagaaagta
tgggttagtttgcggatcagagttgataaatctaaaccgaatggtattggaaccggtcat
agcgtgataaagtgcataaaggatgacatcacgaaggacgttttgctggaggagatcaaa
aagattacccgtcttccaatgtacgttgatcgcattcgaagggatacacaagaagctgaa
cgccgcaagcatggaaaccgtaaagggtaa
DBGET
integrated database retrieval system