Arabidopsis lyrata (lyrate rockcress): 9308475
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Entry
9308475 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS-LIKE 1 isoform X2
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9308475
03036 Chromosome and associated proteins [BR:
aly03036
]
9308475
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9308475
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9308475
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
9308475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAD_SRA
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
zf-RING_4
zf-rbx1
RING_XB3-XBAT31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
9308475
NCBI-ProteinID:
XP_002872406
UniProt:
D7M8G6
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MARDNQLPGDGDGVSTPEESLTYRTCDTPSHVTCVSSPPLDRSGDVDPLPVSGIGGHESG
GSKADESMIDTDETKKRKRLLSGEEKSDGEIASVDDGVDVFAAICEDLNCSLCNQLPDRP
VTTQCGHNFCLKCFEKWIDRGNETCAKCRSPIPDIMAGNPRVNSSLVPVIRYVKVAKGAG
AGTANFFSFTSNQGGPENAFRTKRAKTGRANAACGRIYVTVPFDHFGPIPAENDPVRNQG
VLVGESWKDRVECRQWGAHFAHVSCIAGQSDYGAQSVAISGGYKDDVDHGEWFLFTGRGR
RNFNNEDQEFEELNEALRVSCEMGYPVRVVRSYKEKHSAYAPEEGVRYDGVYRIEKCWRK
ARFQDSCKVCRYLFVRCDNEPAPWNSDENGDRPRPLPDIPELETATDLFERKESPSWDFD
EAEGRWRWMKPPPANHEQRKRMRIAMTCLLLFVMIIFVGSSSILYRV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgacaaccagcttccaggcgacggcgacggtgtatccacgccggaggaatcc
ctcacttaccgcacgtgcgataccccttcgcacgtgacctgcgtttcatctcctcctctt
gatcgctccggcgatgttgatcctcttcctgtttccggcatcgggggacacgaatctggt
ggctcaaaggccgatgagtctatgattgacacagatgagactaaaaagaggaaacggtta
ctcagtggtgaggaaaagagtgacggagaaatcgcgagtgtcgatgacggtgttgatgtg
tttgctgcgatttgtgaagacttgaattgttctttgtgtaatcaattgcctgatagaccc
gttacgacacaatgtgggcacaacttctgcttaaaatgttttgagaagtggattgatcga
ggtaatgaaacgtgtgcaaaatgtcgtagcccaattcccgatataatggcaggcaatcct
cgtgttaactcgtccctcgtgcctgttatccgttatgtaaaagttgctaaaggtgctggt
gctggaactgcaaattttttttcttttacaagcaaccaaggtggtccagagaatgctttt
agaaccaagcgcgcaaaaactgggagggcgaatgctgcatgtggaaggatatatgttact
gtaccatttgatcattttggtcctataccagctgaaaatgatcctgttaggaaccaaggt
gttttagttggagaatcctggaaggatcgagtagagtgtcggcagtggggggctcacttt
gcacatgtttcttgcattgctggacaatcagactacggagctcaatctgtagcaatctct
ggaggttataaggatgacgtggatcatggagaatggtttctattcacaggaaggggaagg
agaaatttcaataacgaggatcaggagtttgaagaattgaatgaagctttaagagttagt
tgcgaaatggggtatccagttcgagttgtcaggtcttacaaggagaagcattctgcatat
gcccctgaggaaggagtgagatatgacggtgtctacaggatcgagaaatgctggcgaaaa
gctagattccaggattcctgtaaggtctgtcgttacctgtttgtgagatgtgacaatgag
ccagctccatggaacagtgatgagaatggagatcgtccaagacctttgcctgatatccca
gagcttgaaacggccacagacctgtttgagagaaaggaaagtccatcatgggattttgat
gaagctgagggccgttggagatggatgaagcctccacctgctaatcatgagcagaggaag
agaatgaggatcgctatgacatgtcttctcctttttgtcatgatcatttttgttggttca
tcatctatcttataccgggtttag
DBGET
integrated database retrieval system
