Arabidopsis lyrata (lyrate rockcress): 9308502
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Entry
9308502 CDS
T01578
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03430
Mismatch repair
aly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
9308502
03460 Fanconi anemia pathway
9308502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aly03400
]
9308502
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
9308502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
9308502
NCBI-ProteinID:
XP_020878568
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MEEENSPATAIAPREPPKIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISV
VVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTKYEDLFSLSSMGFRGEALASMTY
VAHVTVTTITKGQIHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMTARRKTLQNS
ADDYGKIVDLLSRMAIHHNNVSFSCRKHGAVKADVHSVMSPSRLDSIRSVYGVSVAKNLM
KVEVSSCDPSGCTFDMEGFISNSNYVSKKTILVLFINDRLVECSALKRAIEIVYAATLPK
ASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIIIEMIQSEVEVKLRNANDTRTFQEQ
KVEYIQSTLTSPRSDSTVSPKPSGQKAQKVPVNKMVRTDSSDPAGRLHAFLQPKPHNLPD
KVSSLSVVRSSVRQRRNPKETADLSSVQELIAGVDSCCHPGLLETVRNCTYVGMADDVFA
LVQYNTHLYLANVVNLSKELMYQQTLRRFAHFNAIQLSDPAPLSELILLALKEEDLDPET
DKNDDLKERIAEMNTELLKEKAEMLEEYFSVYIDSDGNLSRLPVILDQYTPDMDRVPEFL
LCLGNDVEWEDEKSCFQGVSAAIGNFYAMYPPLLPNPSGDGIQFYTKRGESSQEKSDLDG
NVEMEDNLDKDLLSDAENAWAQREWSIQHVLFPSMRLFLKPPASMASNGTFVKVTISSIT
RRSYTCSIP
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaaaattctccggcgacggcgattgcaccgagagagccaccgaagattcaa
cgcctagaagagtcagtggtcaaccgtatcgcagctggtgaagtaatccagcgtccagtt
tcagcggtgaaggagctcgttgagaacagcctcgacgccgattctagttccataagcgtc
gttgttaaagacggtggattaaaactcattcaagtctccgacgacggtcacggtattaga
cgtgaagacttgccgatattatgcgagagacatacgacatcgaagctgactaagtatgag
gatttgttttctctgagttcaatgggatttagaggagaggcattggctagtatgacttat
gttgctcatgttacagtaactactattactaaaggccagattcatggttacagagtgtct
tatagagatggtgtcatggagcatgaaccaaaggcgtgtgcagctgttaaaggaacacag
ataatggtggagaatttgttctacaatatgactgctagaaggaaaacacttcaaaattct
gctgatgattatgggaaaatagtagacttactaagtcggatggctattcatcacaataat
gtcagcttttcttgtcgaaagcatggagctgttaaggctgatgttcactcagtcatgtcg
ccttcgaggcttgattccatcagatctgtttatggggtatcagttgcaaagaacttgatg
aaagtagaagtttcctcctgtgacccctccggttgtacttttgatatggagggtttcata
tccaattcaaactatgtttctaagaagaccatattggtgcttttcattaatgatagattg
gtggaatgctctgccttaaaaagagccattgaaattgtttatgctgcaacattgccaaag
gcatcgaaaccttttgtctacatgtcaatcaatttgccacgggaacatgttgatatcaat
attcacccaacaaaaaaagaggttagcctactaaaccaggaaattattatcgagatgata
cagtcagaggttgaagtaaaactgagaaacgcaaatgatactaggacgtttcaagaacag
aaagtggaatacattcaatctacattaacatccccaagaagtgattctacagtttctccg
aagccttctggacaaaaggcacagaaagttcctgtgaacaaaatggtgagaacggattca
tcagatccagctggaaggttacatgcctttttgcaacccaagccacataatctccctgac
aaggtttctagtctgagtgtagttaggtcttcggtaaggcaaagaagaaacccaaaggaa
actgctgatctttctagtgtccaagaacttattgctggagttgacagctgctgccatcca
ggtttgctggagactgtgaggaactgcacatatgttggaatggcagatgatgtttttgct
ttagttcagtataacacccatctatatctagccaatgtggtgaacctcagcaaagagctt
atgtatcagcaaactcttcgtcgttttgctcattttaatgcaatacagcttagcgatcca
gcccctctgtccgagttgatattgttggctctgaaagaggaggatctagatccagaaact
gataaaaatgatgatctgaaagaaagaatcgctgaaatgaatacagaactcctcaaggaa
aaagcggaaatgttagaggagtatttcagcgtttacattgactccgatggaaatttgtca
cggcttcctgtcattctcgaccagtatacacctgacatggatcgtgttcccgaattttta
ctatgcttgggaaatgatgttgagtgggaagatgagaagagttgctttcaaggagtttct
gcggctattgggaacttttacgccatgtatcctcctcttttgcctaacccatcgggtgac
ggtattcagttctatactaagagaggtgagagctctcaggaaaagtcagatttagatggt
aacgtggagatggaggataatcttgacaaagatcttctgtcagatgctgaaaacgcatgg
gcacaacgtgaatggtcaatccaacacgtgctgtttccgtccatgagattgttcttgaag
ccaccagcttccatggcttcaaatgggacttttgtaaaggttaccatttcttcaattacc
agaaggagctacacatgtagcatcccttga
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integrated database retrieval system
