Arabidopsis lyrata (lyrate rockcress): 9308567
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Entry
9308567 CDS
T01578
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9308567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9308567
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
9308567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Det1
RhoGEF
Motif
Other DBs
NCBI-GeneID:
9308567
NCBI-ProteinID:
XP_020876855
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MFTSGNVTARVFERQIRTPPPGASVNRARHFYENLVPSYTLYDVDSPDHCFRKFTEDGLF
LISFSRNHQELIVYRPSWLTYSTTSDDDDSTPLPRRASKFDSFFTQLYSVNLASSNELIC
KDFFLYHKTRRFGLFATSTAQIHDSSPTNDAVPGVPSIDKITFILLRLDDGDVLDERVFL
HDFVNLAHNMGVFLYDDLLAILSLRYQRIHLLQIRDSGHLVDARAIGYFCREDDELFLNS
SSQAMMSQDKSKQQSLSGNKDDDDVAENGLHHSQPQPNPTNSFLSGIKQRLLSFIFREIW
NEESDNVLRVQSLKKKFYFHFQDYVDLIIWKVQFLDRQHLLIKFGSVDGGVTRSADHHPA
FFAVYNMETTDIVAFYQNSAEDLYQLFEQFSDHFTVSSSTPFMNFVTSHSNSVHALEQLK
YMKNKSNSFSQFVKKMLLSLPFSCQSQSPSPYFDQSLFRFDEKLISAADRHRQSSDNPIK
FISRRQPQTLKFKIKPGPECGTADGRSKKICSFLFHPHLPLAISIQQTLFMPPSVVNIHF
RR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaagcggtaacgtcaccgctagggttttcgaacgtcagattcgaactcctcct
cccggcgcttccgtaaatcgcgcaagacacttctacgaaaacctagtcccaagctacaca
ctctacgatgtcgattctcccgatcactgtttccgcaaattcacagaagacggactcttc
ctcattagtttcagccgtaaccaccaagaactcatagtctatcgtccttcttggctcaca
tattcaacaacctccgatgatgatgattccactcctctacctcgccgtgcttcgaaattc
gatagcttcttcactcaactctactcagtcaatcttgcttcatcgaacgaacttatctgc
aaagacttcttcctctaccacaaaactcgtcgtttcggtcttttcgctacttcaacagct
cagatccacgattcatctcctactaatgacgcggttcctggtgttccatcgattgataag
atcactttcatacttcttcgattagatgatggtgatgttcttgatgagagggtttttctt
catgatttcgtcaatttggctcataatatgggtgtgtttctttatgatgatcttttagcg
attttatccttgcgttatcagaggattcatcttcttcagattagagattctggtcatctt
gttgatgctcgtgctattggttacttttgtcgtgaagatgatgagcttttcctcaattcg
agttctcaggcaatgatgagtcaagataagagcaaacagcaaagtttatcggggaataag
gatgacgatgatgttgcggagaatgggttgcatcatagtcagcctcagccaaatcctacg
aattcgtttcttagtggtattaagcaacgattactttcttttatattcagggagatttgg
aatgaagaatcggataatgtactgagggttcaaagtcttaagaagaagttttatttccat
ttccaggattatgtcgacttgattatttggaaggttcagtttttggatcgacaacacctg
ctaatcaaatttggcagtgtagatggtggggtaacaagaagtgctgatcatcatccagct
ttcttcgcggtgtataatatggaaacaactgacattgtagcattctatcagaactcagca
gaagatctttaccaattatttgagcagttcagtgatcactttacagtatcaagtagtacg
ccattcatgaactttgtaacatcgcattctaacagcgtccatgctcttgaacaactaaag
tacatgaaaaacaaatcaaacagtttttctcagtttgtgaagaagatgttgctctctttg
cctttcagttgtcagtcacaaagtccctccccatatttcgaccaatctctcttccggttc
gacgaaaagttaatttccgcagcagataggcatagacaatcctcagacaatccaatcaag
ttcatatctcgaaggcaaccgcaaacgctgaaattcaagataaaaccagggccagagtgt
ggaactgcagatggtcgaagcaagaagatatgttcattcttgttccatcctcatttacca
cttgccatctctattcaacaaacacttttcatgccgccttctgtcgtcaatatccatttt
cggcgatga
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