Arabidopsis lyrata (lyrate rockcress): 9308702
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Entry
9308702 CDS
T01578
Name
(RefSeq) protein FIZZY-RELATED 1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9308702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9308702
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
9308702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_WDR41
NBCH_WD40
Beta-prop_HPS5
Beta-prop_Vps41
Tricorn_2nd
Aldo_ket_red
Peptidase_M10_C
Ge1_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
9308702
NCBI-ProteinID:
XP_002874733
UniProt:
D7M0C1
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MEEDESTTPKKKTDSQLNLPPSMNRPTVSLESRINRLIDSNHYHSPSKPIYSDRFIPSRS
GSNFALFDLASSSPKKDGKEDGAGSYASLLKTALFGPVTPEKSDVVNGFSPSRNIFRFKT
ETQRSLNLYPPFGSDVVTGVSPSPVKSPRKILRSPYKVLDAPALQDDFYLNLVDWSAHNV
LAVGLGNCVYLWNACSSNVTKLCDLGVDESVCSVGWALRGTHLAIGTSSGTVQIWDVLRC
NRIRTMEGHRLRVGALAWSSSVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWS
FDNRELASGGNDNKLFVWNQHSTQPVLRYCEHAAAVKAIAWSPHHHGLLASGGGTADRCI
RFWNTTTNTHLSCIDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGH
TYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQSRESEIGALSFGRTTIR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatgaatcaacaacaccgaagaagaagacagattctcagctgaatcttcca
ccgtcgatgaatcgaccgacggtctcacttgagtcacgaatcaaccgtttaattgattca
aatcattatcactctccttctaaacctatttactcagataggtttattccaagtagatct
ggttccaatttcgcgcttttcgatttggcatcttcttcgccgaagaaagatgggaaagaa
gatggggctggttcttatgcgagtcttttgaaaacggcgctttttggtccggtgacaccg
gagaagagtgatgttgttaatgggttttctccgtcgaggaatatttttaggtttaagacg
gaaacgcagagatctttgaatttgtatccgccttttggttctgatgtggttactggtgtt
agccctagtcctgttaagtcgccgaggaagattcttcggtctccttataaggtattggat
gcgccggctctgcaagatgatttttacttgaatcttgtggattggtcggcacataatgtt
cttgcagtgggattagggaactgtgtgtatttgtggaatgcttgtagtagcaacgtaact
aagttatgcgatcttggggttgatgaaagcgtttgctcagtgggctgggcactacgtgga
acacatttggcgattggaactagtagcggaacagtacagatctgggatgtgttacgatgc
aataggataagaacaatggaaggtcatcgtctaagagttggagccctggcatggagttca
tctgtactgtcttcaggtagtagagacaagagcatacttcagagagacattcggactcaa
gaagatcatgtcagtaagctaaaaggtcacaaatccgaaatatgtggactcaaatggtct
tttgacaatcgcgagctagcatcaggtggaaatgacaataagctttttgtatggaaccaa
cattcaacacaaccggttttgagatactgtgaacacgccgcagcagtgaaagccattgca
tggtcaccacatcatcatggacttcttgcttccggtggtggcactgctgatagatgtatc
cgtttctggaacaccacgacaaacactcatttaagttgcatagacaccaacagccaggtg
tgtaatttggtatggtctaagaacgtgaatgagcttgtgagcacgcacggatattcccag
aaccaaatcatcgtctggaaatatccaaccatgtctaaattggcaactctcacgggtcac
acgtaccgcgttctgtaccttgcagtgtcacctgatggacagacgattgtgacaggagca
ggagatgaaaccttgcgattctggaatgtcttcccttctccgaaatctcagagcagagag
agcgaaatcggggcattatcttttggtagaacaacaatccggtga
DBGET
integrated database retrieval system