KEGG   Arabidopsis lyrata (lyrate rockcress): 9308702
Entry
9308702           CDS       T01578                                 
Name
(RefSeq) protein FIZZY-RELATED 1
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    9308702
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9308702
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     9308702
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd WDR55 Beta-prop_Aladin ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st eIF2A WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_RIG_1st Beta-prop_SCAP Beta-prop_WDR41 NBCH_WD40 Beta-prop_HPS5 Beta-prop_Vps41 Tricorn_2nd Aldo_ket_red Peptidase_M10_C Ge1_WD40 Beta-prop_WDR75_1st Beta-prop_SPT8 MIOS_WD40
Other DBs
NCBI-GeneID: 9308702
NCBI-ProteinID: XP_002874733
UniProt: D7M0C1
LinkDB
Position
Unknown
AA seq 474 aa
MEEDESTTPKKKTDSQLNLPPSMNRPTVSLESRINRLIDSNHYHSPSKPIYSDRFIPSRS
GSNFALFDLASSSPKKDGKEDGAGSYASLLKTALFGPVTPEKSDVVNGFSPSRNIFRFKT
ETQRSLNLYPPFGSDVVTGVSPSPVKSPRKILRSPYKVLDAPALQDDFYLNLVDWSAHNV
LAVGLGNCVYLWNACSSNVTKLCDLGVDESVCSVGWALRGTHLAIGTSSGTVQIWDVLRC
NRIRTMEGHRLRVGALAWSSSVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWS
FDNRELASGGNDNKLFVWNQHSTQPVLRYCEHAAAVKAIAWSPHHHGLLASGGGTADRCI
RFWNTTTNTHLSCIDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGH
TYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQSRESEIGALSFGRTTIR
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggaagaagatgaatcaacaacaccgaagaagaagacagattctcagctgaatcttcca
ccgtcgatgaatcgaccgacggtctcacttgagtcacgaatcaaccgtttaattgattca
aatcattatcactctccttctaaacctatttactcagataggtttattccaagtagatct
ggttccaatttcgcgcttttcgatttggcatcttcttcgccgaagaaagatgggaaagaa
gatggggctggttcttatgcgagtcttttgaaaacggcgctttttggtccggtgacaccg
gagaagagtgatgttgttaatgggttttctccgtcgaggaatatttttaggtttaagacg
gaaacgcagagatctttgaatttgtatccgccttttggttctgatgtggttactggtgtt
agccctagtcctgttaagtcgccgaggaagattcttcggtctccttataaggtattggat
gcgccggctctgcaagatgatttttacttgaatcttgtggattggtcggcacataatgtt
cttgcagtgggattagggaactgtgtgtatttgtggaatgcttgtagtagcaacgtaact
aagttatgcgatcttggggttgatgaaagcgtttgctcagtgggctgggcactacgtgga
acacatttggcgattggaactagtagcggaacagtacagatctgggatgtgttacgatgc
aataggataagaacaatggaaggtcatcgtctaagagttggagccctggcatggagttca
tctgtactgtcttcaggtagtagagacaagagcatacttcagagagacattcggactcaa
gaagatcatgtcagtaagctaaaaggtcacaaatccgaaatatgtggactcaaatggtct
tttgacaatcgcgagctagcatcaggtggaaatgacaataagctttttgtatggaaccaa
cattcaacacaaccggttttgagatactgtgaacacgccgcagcagtgaaagccattgca
tggtcaccacatcatcatggacttcttgcttccggtggtggcactgctgatagatgtatc
cgtttctggaacaccacgacaaacactcatttaagttgcatagacaccaacagccaggtg
tgtaatttggtatggtctaagaacgtgaatgagcttgtgagcacgcacggatattcccag
aaccaaatcatcgtctggaaatatccaaccatgtctaaattggcaactctcacgggtcac
acgtaccgcgttctgtaccttgcagtgtcacctgatggacagacgattgtgacaggagca
ggagatgaaaccttgcgattctggaatgtcttcccttctccgaaatctcagagcagagag
agcgaaatcggggcattatcttttggtagaacaacaatccggtga

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