Arabidopsis lyrata (lyrate rockcress): 9308714
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Entry
9308714 CDS
T01578
Name
(RefSeq) protein transport Sec1b isoform X1
KO
K15292
syntaxin-binding protein 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9308714
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9308714
Membrane trafficking [BR:
aly04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
9308714
SNARE
SNARE associated proteins
Syntaxin-binding proteins
9308714
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9308714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
ATG17_like
SseC
Motif
Other DBs
NCBI-GeneID:
9308714
NCBI-ProteinID:
XP_002874754
UniProt:
D7M0F4
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSFSDSGSSSNGGDYKNFRQITRERLLYEMLRPEKNGSSKLTWKVLVMDKFTVKIMSSAC
KMSEITQEGISLVEVITKHRQPMTSMEVIYFIQPTEENVTAFLSDMTGKSPLYKKAFVFF
SSPVSRGLVNLIKKDMRAMKRIGALKEMNLEYISMDIQGYVTNNENALEELFSDDENHQR
ADACLNVVAKRIATVLASLKEYPFVRYRAAKALDATTMTTYRELIPTKLAASVWNCLARY
KQTIEDFPQTETCELLILDRSIDQIAPLIHEWTYDAMCHDLLNMEGNKYTYEVPSKTGDK
PEKKEVLLDEEDPIWVELRDAHIADASERLHEKMTNFVSKNKAAQLKHSSKDFGDLSSKD
LQKMVHALPQYSEQIDKLSLHVEIARTINRTIMEKGLRDLGQLEQDLVFGDAGRKDVIKF
LSTNHIISHESKLRLMMIVAAIYTKKFEGEKGRKMMELAKLSGDDVVAVNNMRLLGPVHT
ESKKSTTGSFPLKFDVLKKKRAARRDRVDETQTWQLSRFYPIVEELVEKLSKGHLPKQDY
PCMNEPKPTFYSGSQSPSASPVLPHSRRTPTWARRHLSDDGYFSDSVLGRASSGFKRKGQ
RIFVFIVGGATRSELRVCHKLTEKLDREVILGSSSFLDPQTFLTKMKQLNEEEEISLDDI
VI
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctccgattctggatcgtcctctaatggcggagattacaagaatttcagacaa
atcactagagaaagattactctatgaaatgcttaggccagaaaaaaatggaagctctaaa
ttaacttggaaggtacttgttatggacaagttcacagtgaagataatgtcatctgcttgc
aaaatgtctgagatcacacaagaaggcatttctttggttgaggttataactaagcataga
caacctatgacttccatggaagttatatactttattcaaccgaccgaagagaatgttact
gcgtttttatcagatatgactggaaaatcaccactttacaagaaggcttttgttttcttt
agttcgcctgtttcgagaggcttagttaatctcattaagaaggacatgcgagcgatgaaa
cgaattggggcattgaaagagatgaatttggagtacattagcatggacatccaggggtat
gttacaaataatgaaaatgctttagaagaacttttcagtgacgatgaaaaccatcaaaga
gcagatgcttgcttgaatgtggtagctaaacgaattgctacagttttggcctcgctaaag
gaatacccctttgttcgctaccgtgcagccaaagctcttgatgccacaacaatgacaact
taccgagagttgattcctacaaagcttgctgctagtgtatggaattgtctggcaagatac
aaacagacaatcgaagattttcctcagactgaaacatgcgaactacttatcttggatcga
tccatagaccagatcgcacctctcattcatgagtggacatatgatgcgatgtgtcacgat
ttgcttaatatggaaggaaataaatacacatacgaggttccgagtaaaactggtgataaa
cctgagaagaaagaggttcttttagatgaagaagatcccatttgggtggagcttcgtgat
gctcacattgcagatgcaagtgaaagattgcatgaaaagatgacaaactttgtgtcgaag
aacaaagctgcgcaattgaaacacagctcaaaagactttggtgacctttcatcaaaagac
ttgcagaagatggttcacgctttgcctcagtacagtgagcaaattgacaagctttctcta
catgtagagattgctagaacaattaacagaactatcatggaaaaaggtctaagagatctc
gggcagctcgagcaggaccttgtatttggggatgctggaagaaaggacgttatcaaattt
ctgagcaccaaccatattataagccacgaaagcaagctgaggttaatgatgattgttgcg
gcaatatatacgaagaagttcgaaggtgaaaagggacgaaagatgatggagctagcaaaa
ttgtcgggcgatgatgtagtagctgtgaacaatatgagattacttggaccagtacatacg
gagtccaaaaaaagcacaacagggtctttccctctcaagtttgatgttcttaagaagaag
cgagctgctcgaagagaccgggttgatgaaactcaaacatggcaactgtctcgtttttat
ccgatcgtagaggaacttgttgagaaacttagcaaaggtcatttgccaaagcaagattac
ccttgtatgaatgaaccaaagccaaccttttattctggctctcaatctccatcagctagt
ccggtattgcctcactcaagacgaacaccaacatgggcaagacgccatctttccgatgat
ggatattttagtgactcggttctaggacgagcatctagcggattcaagagaaagggacag
cggattttcgtgttcatagtaggaggagcaacgagatcagagttaagagtctgccacaaa
cttacggagaagctcgacagagaagtgatcttaggctcctccagcttccttgatccccaa
actttcctcactaaaatgaaacaactgaacgaagaagaggagatctcacttgatgatatt
gtcatttga
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