Arabidopsis lyrata (lyrate rockcress): 9308865
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Entry
9308865 CDS
T01578
Name
(RefSeq) RNA-binding protein BRN1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9308865
Spliceosome [BR:
aly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
9308865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RBD_DGKtheta
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
9308865
NCBI-ProteinID:
XP_020876403
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MAEAKEENREKNEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRG
CCFLLCPSREEADKLVNACHNKKTLPGASSLLQVKYADGELERLEHKLFVGMLPKNVSEA
EVQSLFSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLV
VKWADTERERHTRRLQKAQSHIARLSNADPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG
YMLPPIQNQAAFPNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPANYMGSGYPAVR
GHPFPFAYPRGIVSPRPLSSSPGSISPGIANSGMSTTPLGIGLSSVVQTEGPEGANLFIY
NIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGKLSICLVFPLLKLVHCEGRKN
AFFCCCCWLQVLLVTTHKQPRRTLLT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcgaaggaggagaatagggagaaaaacgaagaagaagagagcgtaaagctt
ttcgtcggacaaattccgaaacatatgtcggaatctcaactcttaacattgtttcaagag
ttcgctgtcgtagacgaggtcaatatcatcaaggacaagattacacgcgcctctcgagga
tgttgttttctgctatgtccatcgagagaagaagcagataagttggtcaatgcttgccat
aacaagaagacattgcctggggcgtccagtctattgcaagtaaagtatgcagatggcgaa
ttggaaaggctagagcataagctctttgttggtatgcttccaaagaatgtctctgaagct
gaagttcaatctttattctccaagtatgggaccataaaagatctacagattctaagaggt
gctcaacaaacaagcaaaggctgtgcttttcttaagtatgagacaaaagaacaagctgtt
tctgccatggaatccatcaacggaaaacataaaatggagggttcgactgttcctttagtt
gtcaaatgggcagacacagaacgagaaagacacacaagaagacttcaaaaggctcaatct
cacatcgctcgattatctaacgctgatccaacaaatccctcattgtttggagcattacct
atgggttatgttccaccatataatggatatggttatcatcagcctcctggaacttatggt
tacatgctaccaccaattcagaaccaagctgcatttcccaatatgattgcacaaccaaac
caaggtaataacaatgcattgcaaggaacatcgcctgactctgtgccacctcgtttggcc
cgtagaaactttcctatgcctcctgctaactacatgggatctggttatcctgctgtacga
ggtcatccttttccatttgcttatcccagaggaattgtgagtcctcgccctctaagtagc
tctcctggatccatatcacctggcattgccaacagtggcatgtcaacaacacctttagga
attggtttgagttccgtggttcaaacggaaggtccggaaggtgcaaatctgtttatctat
aatatacctcgggagtttggggatcaagaactcgcggctgcatttcaatctttcggtatt
gttctgagtgccaaggtttttgtagacaaagctactggtgtaagcaaatgtttcggtaag
ctctctatttgtctggtttttcctcttttaaaactggttcattgtgaaggtagaaagaat
gcattcttttgttgttgctgttggttgcaggttttgttagttacgactcacaagcagccg
cgcagaacgctattgacgtga
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