Arabidopsis lyrata (lyrate rockcress): 9308870
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Entry
9308870 CDS
T01578
Name
(RefSeq) LEC14B protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9308870
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
9308870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
NBCH_WD40
Cytochrom_D1
Beta-prop_IFT140_1st
Beta-prop_SCAP
WDR54
Motif
Other DBs
NCBI-GeneID:
9308870
NCBI-ProteinID:
XP_002872801
UniProt:
D7M3A8
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MFFGPSEIDTDEMGYAMSRLEIESDLCDTGKDFCGVGSSSASHRSSEHLADLDHEISQVT
KLKSSPHQRYSREVPGRHQLPVSTVRMLAGRESNFSGRGRFSAADCCHMLSRYLPIKGPW
LVDQMDSRAYVSQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLS
PDQRNLVYASMSPIVHIVDVGSGTTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTD
GRDIVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD
RRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAPARHEV
LRNYEWDYRWMDYPTEARDLKHPLDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTGS
NDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWEFPGSGEAPI
MSKKRVRRRHFYY
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgttttttggaccaagtgagattgatactgacgaaatgggttatgcaatgagtagactt
gagatagaatccgatctatgtgatactggaaaagacttttgtggagttggtagtagtagt
gctagtcacagatcaagtgaacatttggcagatttagaccatgaaatcagccaggttact
aaattgaaatctagtcctcatcaacggtatagccgtgaagtccctgggagacatcagtta
cctgtgtctactgtgaggatgttggctggtcgagaaagtaatttctctggaagagggagg
ttttccgccgctgattgttgccatatgttaagcagatatttacctataaaaggtccttgg
cttgtagatcaaatggacagccgagcatatgtctctcagttttcaactgatggttctctc
tttattgctgggtttcagggtagccgtattcggatttacaatgtagagaagggctggaaa
gttcaaaaggatatacttgcaaaaagcttgcgctggactgttactgatacttctctatcc
cctgatcagcgaaatctggtttacgcaagcatgtcacctattgttcacattgttgatgtt
gggtccggtacaaccgagtctcatgcaaatgttacggagatccatgatggattagacttc
tcttctgatgaagatggaggctactcttttgggatattctctgtgaaattttcaaccgat
ggacgagacattgttgctgggagcagtgatgattccatctacgtttatgatctcgaagca
aatcgagtttcactccggactgttgcacacacgtctgatgtaaatactgtgtgctttgct
gatgaaagtggaaacctgattttatctggaagtgatgataacctctgcaaggtgtgggat
aggcgttgtttcatcggaagagataagccagctggtgttttagtgggacatctggaaggt
gttacctttatcgatagccgtggagatggtcgctattttatatcaaatggtaaagaccaa
actatcaaattgtgggatatcagaaaaatgtcctcaagcgcacctgcaaggcatgaggtg
ctaagaaactatgaatgggattacagatggatggattatcctactgaagcaagagatcta
aagcacccactcgatcagtcagtgtcaacatataaaggtcactcagtcttgcgtactctc
atccgttgttacttctctccagcgcatagtactggccaaaaatacatctacacaggatct
aacgacagttccgtctacatatatgacttggtaagtggagataaagtggcagtgctaaag
caccatagctcacctgtaagagactgtaattggcacccgtattacccaacccttataagc
tcttcgtgggacggagatcttgtgaagtgggaatttccagggagcggtgaggcgccgatt
atgagtaagaagagagttcgaaggagacatttctactactga
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integrated database retrieval system