Arabidopsis lyrata (lyrate rockcress): 9308878
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Entry
9308878 CDS
T01578
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9308878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9308878
03032 DNA replication proteins [BR:
aly03032
]
9308878
Spliceosome [BR:
aly03041
]
Complex A
U1 snRNP components
Sm proteins
9308878
U2 snRNP components
9308878
Complex B
U1 snRNP components
9308878
U4/U6.U5 tri-snRNP components
9308878
Complex C
U2 snRNP components
9308878
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
9308878
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
WHD_ArnR1
Gemin7
EBNA2_Core
YomU_Tube
Motif
Other DBs
NCBI-GeneID:
9308878
NCBI-ProteinID:
XP_020878329
LinkDB
All DBs
Position
Unknown
AA seq
116 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDVSMNTHLKAVKLTLKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEDTPRIKPKKPTAGKLPPGRGRGRGRGRGRGRGGR
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgttaggtttttgatgaaattgaacaacgaaacagtttcaattgagcttaag
aacggaaccattgttcatggaaccattacaggtgtagatgttagtatgaacactcattta
aaagctgtgaaactcactctgaaagggaagaatccagttacattagaccatttaagtgtc
aggggaaacaacattcgctattatattcttccagacagtttgaatctcgagactttgctg
gttgaagacactccaagaatcaagcccaaaaagccaactgctggtaagcttccaccaggt
cgtggacgtggtcgtggaagaggccgtggacgtggacgtggtggtcgttaa
DBGET
integrated database retrieval system
