Arabidopsis lyrata (lyrate rockcress): 9308895
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Entry
9308895 CDS
T01578
Name
(RefSeq) protein indeterminate-domain 12
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9308895
Transcription factors [BR:
aly03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
9308895
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
DUF7128
Motif
Other DBs
NCBI-GeneID:
9308895
NCBI-ProteinID:
XP_002872826
UniProt:
D7M3F3
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MDMFSSHSLSYKLSSLSSEASASSGNNTLSTIQEFSGFNNVISSVCTHTETHKTKKRRGL
PGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNSKEQ
QKKKVYVCPETNCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHT
KICGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARIHSTSSSNLTNPNPIFHDHHHF
MVNKSSSLLFTSSPLYNEPSHSTAALSTSSTAALSATALLQKATALSSSTFGGGGQTRSI
GHHRHLTTVNELLGVDRVMVTSSSSSEYDQLVVDGLTSTWQKADRLTRDFLGLTGHGMHV
SVRPGDMLEYAGGVAFPMSAYDTESHHHSFQKAYDHLGFSGPHRI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggatatgttttcatctcattccttgtcctataaactaagctctttgtctagcgaagca
agtgcttcttctggtaacaacacactcagtaccatccaagaattcagtggctttaacaat
gtgatttctagtgtttgtacacacacagagactcacaagactaagaaaaggagaggcctt
cctggaaatcctgatccagatgcagaggtgatcgcattatcaccaaagacacttcttgca
acaaacagattcgtttgtgagatatgcaacaaagggttccaaagagatcagaatctacag
cttcacaggagaggccacaatcttccatggaagctgaaacagaagaacagcaaagaacaa
caaaagaagaaagtttatgtgtgcccagagacaaactgtgttcatcatcatccatctaga
gctcttggtgatctcacagggatcaagaaacacttttgcaggaaacatggagagaagaaa
tggaaatgtgaaaagtgttcaaagttctatgctgttcaatctgattggaaagctcatacc
aagatctgtggtacaagagagtatagatgtgactgtggcactcttttctcgaggaaagac
agtttcataacgcatagagcgttttgtgatgcattagcagaagaaagtgcaagaatccac
tcaacttcttcctccaatctcacaaaccctaaccctattttccacgaccatcatcacttt
atggtcaacaaatcttcttccttactcttcacgtcatcacctctttacaacgaaccatca
cattccacggccgctctttcgacgtcttccacggcagctctttccgcgacggctctcctc
caaaaggccaccgctctcagctcctccacattcggcggcggaggacagactcgatcaatt
ggtcatcaccgacatttaacgacggtcaacgagcttcttggtgttgatcgtgtcatggtg
acgtcatcttcttcgtctgagtacgaccagctagttgttgatgggctaacgtccacgtgg
cagaaagctgaccgtttgaccagagactttcttggactcacgggtcatggaatgcacgtt
agcgtgagacccggtgatatgctagagtacgcaggtggagtggcgtttcctatgtcggcg
tacgataccgaatctcatcatcactcgtttcagaaggcttacgatcatctgggattctca
gggccccatcgtatctaa
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