Arabidopsis lyrata (lyrate rockcress): 9308915
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Entry
9308915 CDS
T01578
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 39
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040
Pentose and glucuronate interconversions
aly01100
Metabolic pathways
Module
aly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
9308915
Enzymes [BR:
aly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
9308915
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
Crinkler
Motif
Other DBs
NCBI-GeneID:
9308915
NCBI-ProteinID:
XP_002872846
UniProt:
D7M425
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MNNPNRESPIHIIFKLLPLIFFIIFLSTVVSSHSPSYTTHKTHRLTETKTIPELIIADLN
LTILKVNLASSNFSDLQTRLGPNLTHCERCAFEDCLGLLDDTISDLKTAISKLRSSSFEF
NDVSLLLSNAMTDQDTCLDGFSTSDNENNNDMMYELPENLKESILDISNDLSNSLDMLQM
ISGKNSTLESSEVDVEYPSWVSKNDKRLLEAPVQEITNFNLSVAIDGTGNFTTINAAVSA
APNKSDTRFIIYIKGGEYFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTAT
VGVKGKGFIAKDISFVNFAGLAKEQAVALRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYR
ECDIYGTIDFIFGNAAVVFQNCSLYARKPNPEHKIAFTAQSRNQSDQPTGISIIHSRILA
APDLIPVKENFTAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEWKKDFALETLYYGEYMN
EGPGANMTNRVTWPGFRRIENETEATQFTVGPFIDGSTWLNSTGIPFTLGF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaataatccaaatagagaaagcccaattcacataattttcaaattactgccattaatc
tttttcataatcttcttatccaccgttgtttcatctcattcaccatcctacaccactcac
aaaacgcatcgtttaaccgaaaccaaaaccatccctgagctcataatcgccgacttaaac
ctaaccatcttaaaggttaatctcgcttcatccaacttctctgacctccaaacccgtctt
ggtccaaacctaacccactgtgaacgttgcgcattcgaagactgtctcgggctactcgat
gacaccatctccgacctcaaaaccgcaatctccaaactccgatcttcctcttttgagttc
aacgacgtcagtttgttgctcagcaacgccatgacagaccaagacacgtgtcttgatggt
ttctcgacaagcgacaatgagaataataatgatatgatgtatgaattgcctgagaacttg
aaggagagcatcttagacatctctaacgaccttagcaactccctcgatatgcttcagatg
atctcagggaagaactctaccctagaatcatctgaagttgacgttgagtacccgagttgg
gtctcaaagaatgacaagagactccttgaggctccagtacaagagatcaccaattttaat
ctctcagtggcgattgatggtaccggaaacttcacaaccattaatgccgccgtctctgcc
gctcccaacaagagtgatactagatttattatctatataaaaggtggggaatattttgag
aacgtcgaattaccgaagaagaagacaatgataatgtttatcggagatggtatcggaaaa
acagtcataaaagcaaaccgcagccgcattgatggatggtcaacatttcaaactgctacc
gttggcgtgaaaggtaaaggtttcatagctaaggacatatccttcgtgaattttgctgga
ctggccaaagaacaagccgtggcattgcgaagcggctctgatcactctgccttttatcgt
tgtgagttcgatggttaccaagacaccctttatgttcattcagccaaacaattctatcga
gaatgcgatatatatggtactatcgatttcatattcggcaacgcggctgttgtgttccag
aattgtagtctttatgctcgtaaaccaaatcctgaacataaaattgcattcaccgctcaa
agccgcaatcagtcagaccagcccaccggtatatctatcattcatagtagaatcttggcc
gcacctgatttgatccctgtgaaagaaaatttcacggcgtacttaggtcgaccatggaga
aaatattctaggacggttatcataaaatcatttattgatgatctcatacatcctgctgga
tggttggagtggaaaaaagattttgcacttgaaaccttatattatggagagtatatgaat
gaagggcctggggcaaacatgacaaatcgggtcacatggcccggttttcgacgcatcgaa
aacgaaacggaggcaacccaattcaccgtcggtccatttatcgatggtagcacatggctt
aattcaaccggcatcccttttactctcggtttctaa
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