Arabidopsis lyrata (lyrate rockcress): 9309080
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Entry
9309080 CDS
T01578
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
9309080
04980 Cobalamin transport and metabolism
9309080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9309080
Membrane trafficking [BR:
aly04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
9309080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LMBR1
SLATT_1
CCSMST1
Motif
Other DBs
NCBI-GeneID:
9309080
NCBI-ProteinID:
XP_002873012
UniProt:
D7M717
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MGDFNLALVIVAIVVCVLVFISSIYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILML
PADVANRHACRHSIYNGACNLTLPMKELWLAVYIVDAVLVFFIIPFAMFFYEGDQDKALG
KRIKSALIWVVTTAVVCALVLGILYGVIGKVDFSVRHLSSATTTFPTSWQFSNNQPCIGN
TARQCSAYTANAASEKTWSMRTTFPEYVVALATIVGSVLFTIFGGVGIACLPLGLITAFI
RRPKAVITRSQYIKEATELGKKARDLKKAADALHQEERSGAKGRKWRKNVKAVEKELLQL
EEDVNLLEEMYPQGEQAETAWAFTVLGYLAKFILGILGLIVSVAWIAHIIIYLLVDPPLS
PFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLSVIAGAMMLGLKLVFITIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIGF
VVLAGLTFLYYIAFGWRRKKPSGRFQLST
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggagatttcaatctcgctctcgtgattgttgcgatcgtagtttgtgtccttgttttc
atctccagtatctacctcctcgtcaactatcagcatccagatgatgcaaaccaggcttat
ttccccaaattcgttgttgtgtttggtttatcgattgctatgatctccattctcatgtta
ccggcggatgtggctaaccggcatgcttgtcgacattcgatttataatggcgcttgtaat
ctcaccttacccatgaaggagctttggcttgccgtttacattgttgacgctgtgcttgtc
ttcttcattatccccttcgctatgtttttctatgaaggcgaccaggacaaggctcttggg
aagaggataaaaagtgctttgatttgggtggttactacagctgttgtttgtgctctggtg
cttggaattttatacggagtcattgggaaggtggacttctctgtaaggcacttgtcttct
gccacaacgactttccctacttcatggcagttttcaaataatcaaccttgcattggtaac
actgctcgtcagtgctcagcatatacagctaatgctgcgtctgaaaagacatggtccatg
cgtactacgtttccagaatatgttgttgctcttgctacaattgttgggtcagtgctcttc
acgatatttggtggtgttggtattgcttgcctacccttgggccttatcactgcattcatc
aggcgaccaaaggctgttatcactcggtcacagtatataaaggaagcaactgaactaggt
aaaaaggcaagagatctaaagaaagcagctgatgcacttcaccaggaagaacgaagtggt
gctaagggaaggaagtggaggaaaaatgtgaaagcagttgaaaaggagttgctccaattg
gaagaagatgtgaacctcttagaagagatgtatccgcaaggagagcaggcagagactgct
tgggccttcactgtcctgggatacttggccaagtttattcttggaatcttaggattaatt
gtttctgtggcttggattgctcacatcatcatatatctacttgttgaccctcccctctct
ccttttcttaatgaagttttcatcaaactggatgacgtctggggtctcctgggcacagct
gcctttgctttcttctgtttctatctcctactttctgttattgctggggcaatgatgctt
ggtttgaagctggtcttcattaccattcatccaatgaaatggggagccactcttatgaac
tcttttctcttcaatgtcggtctcattctcctctgttctatcagtgtgattcaattctgc
gccactgcatttggatattatgctcaagccaccgccgctcaggagatatttggccacact
ttgcagtcccttcgcggtattaagtacctctacaagtacaatgtgttccagatcgggttt
gttgtcctcgctggactgacctttttatattacatagcctttggatggagaagaaaaaag
ccgagcggtagattccagctctctacctaa
DBGET
integrated database retrieval system