Arabidopsis lyrata (lyrate rockcress): 9309145
Help
Entry
9309145 CDS
T01578
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9309145
Transcription factors [BR:
aly03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
9309145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
9309145
NCBI-ProteinID:
XP_002871015
UniProt:
D7M7Z8
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MQMIPGDPFSISSSMGGFVHQETHLHHPQQQIPDLNPNSNPNPNVKPNSSSAKKKRNQPG
TPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIK
KKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKT
CGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNNNPVISTTNLNFGNDSNV
MNNPNLPHGFVHRGVHHPDINAAISQFGLGFGHDLSAMHAQGLSEMVQMASTGNHHPFPS
SSSSLPDFSGHHQFQIPTTSTNPNLTLSSSSTSQQTSASLQHQTLKDSSFSPLFSSSSEN
KQNKPLSPMSATALLQKAAQMGSTRSNSTTAPSFFAGPTMTSSSATASPPPPPRSSSPMM
IQQQLNNFNTNVSRENPNLAPPPLSGVTTSSVDNNPFQSNRSGLNLVQQMGLTRDFLGVS
NEHHPHQTGRRPFLPQELARFAPLG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgattccaggagatccattttctatttcatcctccatgggagggtttgttcat
caagaaacacaccttcatcatcctcagcagcagatccctgacctcaaccctaattctaac
cctaacccaaatgtgaaaccaaactcttcatcagccaagaagaagagaaatcaacctggc
actccagatccagatgctgatgtcatcgctctatcgccaacaacactcatggcaacaaac
agattcgtgtgcgagatctgcaacaaagggtttcaaagggaccaaaacttacaactccat
cgccgtggccacaatcttccatggaagctgaagcaacgatccaaacaagaggtgataaaa
aagaaagtatacatatgccctatcaagacttgtgtacaccatgatgcttctagggccctt
ggagacctcactgggatcaagaaacactatagccgcaaacacggtgaaaagaagtggaag
tgcgaaaagtgttctaagaaatacgctgttcagtctgattggaaggcacatgcgaaaact
tgtggtactcgcgagtataaatgtgactgtggcacgttgttctccaggaaagatagtttc
atcacacatagagcgttctgcgacgcattgactgaagaaggtgcgaggatgagttcacta
agtaataacaatcctgtgatctctacgacgaatctgaattttggaaacgattcaaatgtt
atgaataatccaaatcttcctcatggatttgttcaccgaggagttcatcatcccgacatt
aatgctgctatctctcaattcggtttagggtttggacatgacctaagtgcaatgcatgcg
caaggtctatccgagatggttcaaatggcctccaccggcaaccaccaccccttcccgtcg
tcatcatcatccctccctgatttctccggccaccaccaattccaaattccaacgacttcc
acaaaccctaatctcaccttatcatcatcctcaacatcacaacaaacctcagcttctcta
caacaccaaaccctaaaagactcatctttctcaccactcttctcctcttcctccgaaaac
aaacaaaacaagcctctctctccaatgtctgcaacagctctcttacaaaaagctgcacaa
atgggctctactcgaagcaattccaccaccgctccgtccttcttcgcaggcccaacaatg
acatcatcctcagccaccgcttctcctcctcctcctcctagatcgtcttcaccaatgatg
atccaacaacaactaaacaacttcaacaccaatgtctcaagagagaatcccaatcttgct
ccccctcctcttagtggtgtcaccactagtagtgtggataataatccctttcaatcgaac
cggtcgggtctaaacctggttcaacaaatgggtctaacccgggattttcttggagtgagc
aacgagcatcaccctcaccaaacgggtcgtcgtccctttttgcctcaagaactcgcaagg
tttgctccattgggttga
DBGET
integrated database retrieval system