KEGG   Arabidopsis lyrata (lyrate rockcress): 9309145
Entry
9309145           CDS       T01578                                 
Name
(RefSeq) zinc finger protein JACKDAW
  KO
K25870  zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aly03000]
    9309145
Transcription factors [BR:aly03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    9309145
SSDB
Motif
Pfam: C2CH-4th_BIRD-IDD C2H2-2nd_BIRD-IDD C2CH-3rd_BIRD-IDD zf-C2H2 zf-C2H2_jaz zf-met zf-C2H2_STOP2_C zf-C2H2_4 zf-C2H2_6
Other DBs
NCBI-GeneID: 9309145
NCBI-ProteinID: XP_002871015
UniProt: D7M7Z8
LinkDB
Position
Unknown
AA seq 505 aa
MQMIPGDPFSISSSMGGFVHQETHLHHPQQQIPDLNPNSNPNPNVKPNSSSAKKKRNQPG
TPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIK
KKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKT
CGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNNNPVISTTNLNFGNDSNV
MNNPNLPHGFVHRGVHHPDINAAISQFGLGFGHDLSAMHAQGLSEMVQMASTGNHHPFPS
SSSSLPDFSGHHQFQIPTTSTNPNLTLSSSSTSQQTSASLQHQTLKDSSFSPLFSSSSEN
KQNKPLSPMSATALLQKAAQMGSTRSNSTTAPSFFAGPTMTSSSATASPPPPPRSSSPMM
IQQQLNNFNTNVSRENPNLAPPPLSGVTTSSVDNNPFQSNRSGLNLVQQMGLTRDFLGVS
NEHHPHQTGRRPFLPQELARFAPLG
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgcagatgattccaggagatccattttctatttcatcctccatgggagggtttgttcat
caagaaacacaccttcatcatcctcagcagcagatccctgacctcaaccctaattctaac
cctaacccaaatgtgaaaccaaactcttcatcagccaagaagaagagaaatcaacctggc
actccagatccagatgctgatgtcatcgctctatcgccaacaacactcatggcaacaaac
agattcgtgtgcgagatctgcaacaaagggtttcaaagggaccaaaacttacaactccat
cgccgtggccacaatcttccatggaagctgaagcaacgatccaaacaagaggtgataaaa
aagaaagtatacatatgccctatcaagacttgtgtacaccatgatgcttctagggccctt
ggagacctcactgggatcaagaaacactatagccgcaaacacggtgaaaagaagtggaag
tgcgaaaagtgttctaagaaatacgctgttcagtctgattggaaggcacatgcgaaaact
tgtggtactcgcgagtataaatgtgactgtggcacgttgttctccaggaaagatagtttc
atcacacatagagcgttctgcgacgcattgactgaagaaggtgcgaggatgagttcacta
agtaataacaatcctgtgatctctacgacgaatctgaattttggaaacgattcaaatgtt
atgaataatccaaatcttcctcatggatttgttcaccgaggagttcatcatcccgacatt
aatgctgctatctctcaattcggtttagggtttggacatgacctaagtgcaatgcatgcg
caaggtctatccgagatggttcaaatggcctccaccggcaaccaccaccccttcccgtcg
tcatcatcatccctccctgatttctccggccaccaccaattccaaattccaacgacttcc
acaaaccctaatctcaccttatcatcatcctcaacatcacaacaaacctcagcttctcta
caacaccaaaccctaaaagactcatctttctcaccactcttctcctcttcctccgaaaac
aaacaaaacaagcctctctctccaatgtctgcaacagctctcttacaaaaagctgcacaa
atgggctctactcgaagcaattccaccaccgctccgtccttcttcgcaggcccaacaatg
acatcatcctcagccaccgcttctcctcctcctcctcctagatcgtcttcaccaatgatg
atccaacaacaactaaacaacttcaacaccaatgtctcaagagagaatcccaatcttgct
ccccctcctcttagtggtgtcaccactagtagtgtggataataatccctttcaatcgaac
cggtcgggtctaaacctggttcaacaaatgggtctaacccgggattttcttggagtgagc
aacgagcatcaccctcaccaaacgggtcgtcgtccctttttgcctcaagaactcgcaagg
tttgctccattgggttga

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