Arabidopsis lyrata (lyrate rockcress): 9309187
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Entry
9309187 CDS
T01578
Name
(RefSeq) malate synthase
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00620
Pyruvate metabolism
aly00630
Glyoxylate and dicarboxylate metabolism
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
aly01200
Carbon metabolism
Module
aly_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
9309187
00630 Glyoxylate and dicarboxylate metabolism
9309187
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
9309187
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GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
HpcH_HpaI
DUF6986
Motif
Other DBs
NCBI-GeneID:
9309187
NCBI-ProteinID:
XP_002873119
UniProt:
D7LWU5
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MELETSVYRPNVAVYDSPDGVEVRGRYDQIFAKILTREALNFVAELQREFRGHVRYAMEC
RREARRRYNSGAVPGFDPSTKFIRDGDWICASVPPAVADRRVEITGPVERKMIINALNSG
AKVFMADFEDALSPSWENLMRGHVNLKDAVDGSITFHDKSRNRVYKLNDQTAKLFVRPRG
WHLPEAHILIDGEPATGCLVDFGLYFFHNYAKFRQTQGSGFGPFFYLPKMEHSREAKIWN
SVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHTVGLNCGRWDYIFSYVKT
FQAHPDRLLPDRVLVGMGQHFMRSYSDLLIRTCHKRGVHAMGGMAAQIPIRDDPKANEMA
LDLVRKDKLREVRAGHDGTWAAHPGLIPICMEAFTGHMGKSPNQIKSVKREDAAAITEED
LLQIPRGVRTLEGLRLNTRVGIQYLAAWLTGSGSVPLYNLMEDAATAEISRVQNWQWIRY
GVELDGDGLGVRVTKELFGRVVEEEMERIEKEVGKDKFKKGMYKEACKMFTKQCTAPELD
DFLTLAVYNHIVAHYPINNSRL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgagacctcagtttatcgaccaaacgtcgccgtctatgattctccggatggt
gtcgaggttcgaggacggtacgaccaaatcttcgctaagattttgacaagagaagctctt
aactttgtggctgagttacagagagagtttcgtggccatgtgaggtatgccatggagtgc
cggagagaggcacgacggcgttacaactccggtgccgttcctgggtttgatccttccact
aagttcatcagagacggtgattggatctgtgcctccgtccctcccgccgttgctgaccgg
agagttgagataaccggtccggtcgagaggaagatgatcatcaacgctcttaactccgga
gctaaagtcttcatggctgatttcgaggacgcattgtctccgagttgggagaatctgatg
agagggcatgtgaacttgaaagatgcagtggatggatccattacgttccatgacaagtca
aggaacagagtttataagctcaacgaccaaaccgctaagctctttgtccggccaagaggt
tggcatctcccggaggctcacatcctcatcgacggtgaacccgccactggatgtcttgtc
gattttggcctttacttcttccacaactacgccaaatttagacagactcaaggttccgga
tttggtccattcttctatctccccaaaatggaacattctagggaagcaaagatttggaac
agcgtgtttgagcgagctgagaagatggctgggatagagagaggaagcattagagcaaca
gtgctgatcgagaccctcccggctgtcttccagatgaatgagatactatatgaactgcgt
gatcacactgtcggtttaaactgtggaagatgggattatatcttcagttatgtcaagacc
ttccaagctcaccctgaccggctcttaccagaccgtgtcctagtcggcatgggccagcat
ttcatgagaagttactctgaccttctcatccgtacttgtcataagcgcggtgtccacgct
atgggtggcatggcggctcagattccaataagagatgacccgaaagcgaatgagatggca
ttggatctagtgaggaaagacaagctaagagaagtaagagctgggcatgatgggacatgg
gcggctcatccaggactcatcccaatatgcatggaagcattcacaggccacatgggcaaa
agtccaaaccaaatcaaatcagtgaagcgcgaagatgcagccgcgataacagaggaagat
ctgcttcaaataccgcgaggagtgcgaacactcgagggtctaaggctgaacacacgtgtg
ggaatccaatacttagctgcgtggttaacaggatcaggatctgtcccactatacaaccta
atggaagacgcggctacggctgagataagccgagtccagaattggcaatggattaggtat
ggagtggaattggatggagacgggctcggagttcgggtgactaaagagttatttgggaga
gttgtggaagaagagatggagagaattgagaaagaagttgggaaagacaagttcaagaaa
ggaatgtataaggaagcttgcaagatgtttacaaagcagtgtaccgcgcctgaacttgac
gatttcctcacacttgccgtctataatcacattgtagctcactaccctatcaataactct
aggctctga
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