KEGG   Arabidopsis lyrata (lyrate rockcress): 9309265
Entry
9309265           CDS       T01578                                 
Name
(RefSeq) autophagy-related protein 18e
  KO
K22991  WD repeat-containing protein 45
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9309265
Membrane trafficking [BR:aly04131]
 Autophagy
  Other autophagy associated proteins
   Others
    9309265
SSDB
Motif
Pfam: PROPPIN WD40_CDC20-Fz Beta-prop_EML_2 WD40 Beta-prop_WDR90_POC16_2nd WD40_WDHD1_1st BCAS3_WD40 WD40_Prp19 ANAPC4_WD40 WDR55 Beta-prop_IFT140_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_EML Beta-prop_IFT80_2nd CPSF_A Beta-prop_WDR19_1st Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR35_2nd Beta-prop_IFT140_1st Ge1_WD40 Nucleoporin_N
Other DBs
NCBI-GeneID: 9309265
NCBI-ProteinID: XP_002873197
UniProt: D7LYB3
LinkDB
Position
Unknown
AA seq 373 aa
MNSMVSTVRGIFTLSKSDTSNSPSDEAKSDLKVLSVAWNQEWSGFIVGTNRGFNVYSCKP
MIKKSISREPHESGFKVAEMLFLSNLFALVGNGYNNSEYPPNKVFVWDDHRFCCLRELAF
KSEVIAVKLTREHIVVVLKQNIYVYTFNNLKVYRLIETLMNPKGLCCVTHVESKAVLACP
GFHPGQVQVHNLRRNVIKFIKAHDSAIACMTFTLDGSLLATASTKGTLIRIFNAVDGTLL
QELRRGMERAEIYNVAISSNRKWVAASSEKGTLHVFRLRPDILSFNLASSSSFMKGILPK
YLYENERSFAQFSLPASTKFIVGFGSENTVLLLGIDGSFRRCKFDQADGGQMVELEHKYF
FSLQETGDTMGLM
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaattcgatggtctccactgtccgtggaatattcacgctttcaaaatctgatacttca
aattcgccatctgatgaagccaagagtgacttgaaggtgttatcagtagcttggaaccag
gaatggagtggtttcatagttggaacaaatcgcgggttcaatgtatatagctgcaaacca
atgatcaagaaaagcatcagccgtgaaccgcacgaatcaggcttcaaagtcgctgagatg
ctcttcctttctaacctatttgctcttgttggaaatggttataacaattccgagtatcct
cctaacaaagtcttcgtttgggacgatcacagattttgctgcctccgtgagctcgctttt
aaatcagaagttatcgccgtgaaactaacgagagaacacattgtggttgtcctgaaacaa
aacatctatgtctacactttcaacaaccttaaggtttaccgtctgatcgaaactctcatg
aatccgaaaggactgtgttgcgtcactcacgttgagtcgaaagcagtcttggcttgtccc
gggtttcatccgggacaagttcaggtccacaacttgagacggaatgtaatcaaattcatc
aaagcacatgattctgctattgcttgcatgacttttactctcgatggaagtctcctcgca
accgctagcacgaaaggaaccctgatcaggatttttaacgcagttgatggtactctctta
caagagttgcggagaggaatggaaagagcagagatctataacgttgcaatctcttcaaat
cggaaatgggtcgctgcgtcaagtgaaaaagggactctccatgtatttcgtttgagacct
gacattcttagttttaatctggcttcttcgtcgtcattcatgaaagggatcttaccgaag
tacttgtacgaaaatgaacggtcgtttgctcagttctcgttgccagcttccaccaagttc
attgtaggttttggatcagagaacactgttcttctcctaggcatcgatggaagtttcagg
aggtgcaaatttgatcaagcagatggagggcagatggtggaattggaacacaaatacttc
ttctccttgcaagagacgggcgacacaatgggtttgatgtga

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