Arabidopsis lyrata (lyrate rockcress): 9309281
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Entry
9309281 CDS
T01578
Name
(RefSeq) anaphase-promoting complex subunit 1 isoform X1
KO
K03348
anaphase-promoting complex subunit 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9309281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9309281
03036 Chromosome and associated proteins [BR:
aly03036
]
9309281
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
9309281
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
9309281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC1
APC1_C
Apc1_MidN
APC1_3rd
PC_rep
Motif
Other DBs
NCBI-GeneID:
9309281
NCBI-ProteinID:
XP_020875904
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MPPGVRQLTVLGKFKPFGLIAEATDGKSPDDSYQYFLFDPELTGADGNEANFSRQREHEL
FIRGNCIIWTSGSRVLKRFTLSSAVIKACWSHLGRGTEAFLCVLQIGCLTIYNTSGEVVS
VPLPRTVKSIWSLPYGLLLQQATEVNPASHVPFSSVSPILSSREMLRQKKEVGNSSPQNF
HSPGTHDLNKRDMPYMSSHLILRDPLEEPGPTYVEERGKLNIMKDYDERTIWTSDLLPLM
TSYNKGKMQHSVWAAEFIESNLEASASCASGIVPDAVLPKRISFRRIWQAKGAKKAASKV
FLATDDAVPVICFLILEQKKLLSVGLQTVEINNEILFDVKADVSWSVSAIAAAPVVVTRS
QVKIGLLPHLDIIVLSPENDLFLYSGKQCLCRYVLPSWLGESIGFGDGVSAKTDSGFRDL
KITGLSDAVLGCINLSVNHSQIFRCALTGKPSSSLANDCIAAIAEGLRSDLYSLFLSLLW
GDGHSDQKSSSIHFEWEALCNIFLEICQKPTVVHLKQPKTSESSWEFLLSSKFHKTYSRF
HNGITSINRLDLEGIVPFDSKICSEETLGSSCELMVQSLDCLHAVYESLKMDNLRKQDLH
HLAVLLCNIAKFLDEKCYLDYYIRDFPRLSTTIGACTTLSSSRKPPNLFRWLENCLRRGC
LSTNFDDLPDLIRRDGCSIVSWARKVVSFYSVLFGDKPEGRTLSSGVPCNIAPGSYSSNE
ELTILAMAGERFGLHQLDLLPSGVSLPLRHALDSCRESPPADWPAIAYVLLGREDMALSV
FRNLSSSKELEMQSNKSLISMSIPYMLHLHPVIVPSSLSESIGLENTKIEDTNSVDGSVI
DGMEHIFNSYTQLRYGRDLRLNEVRRLLCSARPVVVQTSANPTISDQEQQQDQLWRIAQR
TAVLPLGRGAFTLSTIHTLLTEAFTVPKLVLAGRLPAQQNAIVNLDPNIRNIQELKTWPE
FHNAVAAGLRLAPLQGKVSRTWIKYNKPGDPNAVHAGLLFGLGLQGYLHVLNLSDIYQYF
TQDHEITTVGLMLGLAASYRRTMQPDIAKALFFHVPARYQASYAEFEIPTLLQSAALVSV
GMLFEGSAHLQTMQLLLGEIGRRSAGDNVLEREGYAVSAGFSLGLVALGRGGDALGSMDS
LVNRLLQYLGAKEEKSILAPSLENHRSAAQTTDGSTSNVDITAPGAIIALTLMYLKTESE
VIFSKLSIPQTHYDLECIRPDFIMLRVIARNLIMWSRICPTCDWIQSQVPEVVRNGISHL
RDDMDDMYEVDVEALVQAYVNIVAGACISLGLRFAGTRDGNARDLLNNYALYLLNEIKPL
SATPGNAFPRGISKYVDRGTLEMCLYLIIISLSVVMAGSGDLQVFRLLRFLRSRNSADGH
ANYGTQMAVSLATGFLFLGGGMRTFSTNDGSLAMLLITLYPRLPSGPNDNRCHLQAFRHL
YVLATEARWLQTIDVDSGLPVYAPLEVTVKETKLYSETRFCEITPCILPERAILKRICVC
GPRYWPQQIELVPEEKNWWSFGDKSDPFNSGVIYVKRKVGACSYVDDPVGCQSLLSRAMH
KVFGLRTLGESNMIANSHRELDSESVDHLVSTFSSDPSLIAFAQLCCDKSWNNRSDSEFK
EFCLQVLFDCISKDRPALLQVYLSLYTTIGSMADLLVKSDSNMCDSLSISSLKVALAYNE
AVSSGRLASSGGFVQSIFLSSLRKRCEEILNCSTELKINLRNYLTSEAWPDDKSSKLQKD
IIILSWYLKWFSVPSPSIIKAAVEKIKSKSKNSTWAIPLLRLLLPSTHISAISEIDSVFF
SSDETTVS
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaggggttcgccaacttactgtcctcggaaagttcaaacctttcggtctaatc
gccgaagctactgatggtaaatccccggacgattcctatcagtatttcctcttcgatcct
gagctcactggtgctgatggcaatgaagccaacttctcgcggcagagagagcacgagctc
ttcatccgaggcaactgcataatctggacaagcggttcgcgcgtcctcaagcggtttacc
ttgtcttctgccgttattaaggcgtgctggagccaccttggtcgagggacagaagctttt
ctttgtgtgttacaaattggttgcttaacaatatacaacacatcaggcgaagttgtatct
gttccacttccgcgtactgtcaaatcaatatggtctctaccgtatggtctacttcttcag
caagctactgaagtgaatccagcctcacatgttccattttcttctgttagccccatcctt
agttcccgtgagatgctgcgccaaaaaaaagaagttgggaatagttcaccacaaaacttc
cattccccaggcacgcatgaccttaacaaaagagatatgccatacatgtcttcccatctg
attctaagagatccattagaggaacctgggccaacctatgtagaagagagggggaagttg
aatataatgaaggactacgatgagagaacaatttggacaagtgaccttctacctcttatg
acgtcgtataacaaaggcaagatgcaacattctgtgtgggcggccgaatttatagagtca
aaccttgaagcttctgcttcatgtgcaagcggtattgttcctgatgctgttctcccaaag
cggatttcttttcgtagaatatggcaagccaaaggtgctaagaaagctgcatctaaggtc
tttttggcaactgatgatgcagtcccagtaatttgctttctaattctagaacaaaagaag
ctgttatcggtgggactccaaactgttgaaataaataacgaaatcctgttcgatgttaag
gctgatgtaagctggagtgtctctgcgattgctgctgcacctgttgttgtgacacgttct
caagtgaaaataggactgcttccacatttggatatcattgttttatctccagaaaatgac
ctctttctctattcaggaaaacaatgtctctgtagatatgtattgccttcttggttggga
gaaagtattggtttcggggatggagtgtctgcaaaaacagattcaggtttcagggacctg
aagatcacaggattgtctgatgctgtgttaggatgtatcaatctctcagttaaccattca
cagatctttcggtgtgctttaactggtaaaccttcatcgtcacttgcaaatgattgcata
gcagccatagctgagggactacgatccgatctgtacagtttatttctctctcttctttgg
ggagatggtcattctgaccagaaaagttccagtattcattttgaatgggaagcgttatgc
aacatttttctggagatctgtcaaaagcctactgttgtgcatctgaagcaacccaaaaca
tcagagtcctcctgggagtttcttctcagcagcaaatttcataagacctactctaggttt
cacaatggtattacttcaataaatcgtttggatctggaaggaattgtcccatttgattcc
aagatttgtagtgaagaaacattgggcagctcatgtgaattaatggtccagagtttagat
tgtctccatgcagtttatgagagcttgaagatggataatctacggaaacaggatttgcat
cacttggctgttttgttgtgcaatatcgccaagtttctggatgagaagtgttacttagat
tactacatacgtgattttcctcgtctgtcaacaactattggggcgtgcacaaccctttct
tctagcagaaaacccccaaatttatttagatggcttgagaactgtttaaggcgcggatgt
ttatcaacaaactttgatgacctcccagatttgattcgtagagatgggtgctcgatagta
agctgggcaaggaaagttgtttccttctacagtgtgttatttggtgataagccagaagga
cggacactttcatcaggtgtcccctgtaatatcgcgccaggatcatactcaagtaacgag
gaactcactatcttagctatggcaggagagagatttgggcttcaccaactggatttgcta
ccttctggtgtttctctcccgctgagacatgcactggatagctgtcgggaatctcctcca
gctgactggccagcaattgcttatgtgcttcttggacgagaagatatggccctatccgtc
ttcagaaatttgagttcatctaaagaattggagatgcagtcaaataagagtttgatatcg
atgtccataccgtacatgctacatttgcatccagtaattgttccatcctctttatctgag
tcgattggcttggaaaacactaagattgaggatacaaattctgtggatggttctgtgata
gatggaatggagcatatcttcaactcctacacacagttacggtatggccgggatctaagg
ttgaatgaggttagacgtcttttgtgctctgcaagacctgtggtagttcaaacgtcggct
aaccctactatatcagatcaggagcagcaacaggaccagctttggcgcatagcacagagg
actgctgttcttcccctcgggcgtggagcatttacattatcaacgatacacactctttta
actgaggcgtttactgtaccaaagcttgttttagctggtcgactgcctgctcaacaaaat
gccattgttaatctagatccaaacataaggaatatccaagaactaaagacctggccggag
tttcataatgctgttgctgctggtttacgactggctccgcttcagggaaaggtctccaga
acgtggattaaatacaataaacctggagatccaaatgctgttcatgctggacttctgttt
ggactcggattacagggatatttgcatgtgttaaaccttagtgacatataccaatatttc
actcaggaccatgagatcactacggtaggtttgatgcttggtctggctgcttcatacagg
agaacaatgcaacctgatattgcaaaggctctctttttccatgttccggctcgataccaa
gcttcatatgctgagtttgagataccaacacttctacagtctgcagctttagtctccgtt
ggcatgctatttgaaggatcagcacacctgcagacaatgcaattacttttgggtgaaatt
ggccgcagaagtgccggggacaatgtccttgaaagggagggttatgctgtatctgcagga
ttctcacttggtcttgtagctttgggccgtggaggtgatgcgctcggttccatggactcc
ttggtcaatcgcttactccagtatttaggagcgaaagaggaaaaatctatccttgcacca
tcacttgaaaatcaccgaagtgctgcacagacaacagacggaagcacttccaatgttgat
ataactgcacctggagcaataatcgctctcacattaatgtatcttaagacagaatcagag
gtcatcttctcaaagctctctattcctcaaactcattacgatttggagtgcattaggcct
gatttcataatgctccgtgtcattgctcggaacttgataatgtggagcaggatttgtcct
acttgtgattggattcagtctcaagttcctgaagttgtcagaaatggtatcagccacctg
cgagatgacatggatgatatgtatgaggtggatgttgaagcccttgttcaggcatacgtc
aatatagtggctggggcctgcatttcacttgggctgagatttgctggtacgagggatgga
aatgctcgtgacttacttaacaactacgccctctatcttttgaatgagatcaagcctctt
tctgctacacctggaaatgcatttcccaggggaatatccaaatatgttgatcggggaacg
cttgaaatgtgtctttatcttatcattatttctctgtcagtggtcatggcgggatcagga
gacttgcaagtatttcggttgttgagatttttgcgcagccggaactctgctgatggacat
gctaactatggcacgcaaatggcggtgagcttagccacaggatttttgtttcttggaggc
ggtatgcgaacattttcaacgaatgatggctcacttgcaatgttgctcattactctctat
ccacggttaccttctggaccaaatgacaaccgttgtcacctccaggcattcaggcattta
tatgtccttgcaacagaggctcgttggctgcagaccattgatgttgattctggtctgcct
gtctatgcccctctagaagtcacagtaaaagagacaaaactttattcagaaacaagattt
tgcgagattacaccgtgcattctgccagagcgtgctattctaaagagaatttgtgtatgt
ggtcctcgatactggccccaacaaatagagctagtccctgaagagaaaaattggtggagc
tttggggacaagagtgatcccttcaattctggtgttatatatgtcaaaagaaaagtagga
gcttgttcgtatgttgatgatccagttggctgtcagtcgctgctttcacgagcaatgcat
aaggtttttggtttaagaactctgggagaatctaatatgattgctaatagtcatagagaa
ctggactccgaaagtgttgatcacttggtcagcactttctcatcagatccaagcctgata
gcgtttgcacagttgtgctgtgacaaatcttggaataacagatctgattctgaattcaag
gagttctgtctgcaagtgttgtttgactgtataagcaaggatagaccagctcttttgcag
gtttatttatccttgtatacaaccattggttccatggctgatctgcttgtcaaaagcgat
agtaacatgtgtgattcactttccatctcaagcctcaaggttgctcttgcctacaacgaa
gcggtatcaagtggaagattggcctcttcaggtggctttgtacaatcaatcttcttatca
tcgctgagaaagcgatgtgaagagattttgaattgttcaacggagctgaagattaatttg
aggaattatttgacctcagaagcatggcctgatgataagagctcaaagttgcagaaagat
ataataattctctcatggtatttaaaatggttcagcgtaccatctccatcgatcatcaaa
gcagcagtggaaaagatcaaatccaagtccaaaaactcaacttgggcaatacctttgttg
cggttgttgttaccaagtacgcatattagtgcgattagtgaaattgatagtgtgtttttt
tcctcagatgagacaactgtatcgtga
DBGET
integrated database retrieval system
