KEGG   Arabidopsis lyrata (lyrate rockcress): 9309300
Entry
9309300           CDS       T01578                                 
Name
(RefSeq) protein NEDD1 isoform X1
  KO
K16547  protein NEDD1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aly03036]
    9309300
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:aly04812]
    9309300
Chromosome and associated proteins [BR:aly03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     9309300
   Microtubules and associated factors
    gamma-tubulin ring complex
     9309300
Cytoskeleton proteins [BR:aly04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     9309300
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 9309300
NCBI-ProteinID: XP_020875928
LinkDB
Position
Unknown
AA seq 782 aa
MMSNLVEPSWRLLAASGGDTVKLFDVSADSGDPCVLSYTPTPGCAVNSVKWNHTNLVVAS
TGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIW
DLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQV
LRLLDYSRSSRHLLLTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIAS
VGMDKKLYTYDSGSRRSSSCIAYEAPFSSLAFGDNGYILAAGTSNGRVVFYDVRGKPQPV
TVLHAFSNSEDVTSLSWQTSKPVIVNEKNYTSEMALLGSTVEDSVVIPDPLPSTTPSASQ
SALAPGSRGVSASTVNASSVEQTPNRTHLWPGGPLGRLHALRASDSFNDDMGVFSPIIDV
SSVEKWADSEGFNNKEHFVVDKKPSSLLFPSSSKGYSFGDDGNKEHPIFDWKPSSTSKQD
DTRVAFSSFGSTTPTASSKSEDTALTPPEAWGGDKFSEKFNQLANEKFSDKFSHLHAPSR
LAVSSTCASTSGSMFSSSRDFPLSLGQTNLANASSEFPRIRDFSSTFETSSTQTDNNLPS
SPLFTKGITAPGNIDSLRLSPNFTRRFSTYAERISTTSSFSDGASLTLGGSPKIKKTGAE
TREEVLNHLLPRPEMVAATEAGAMPLMNQGGLKQPQTDQQQMMGSSNFTLQLFQRTLEGT
LDSFQNSIHDDVRNLHIEILRQFHMHEMEMSKVLSSILENQAEQMKELKLLRKENQELKE
RL
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgatgtcgaacttggtggagccttcgtggcgcctcctggcagcgagcggcggagatacg
gttaagcttttcgacgtttctgccgattccggcgatccctgcgttttgagctatactccg
acacctggctgtgctgtcaactccgtcaagtggaatcatacgaatttagtggtggcgagt
acgggagaagataagaagatatccctgtggcggaaaaatgggcagagtttaggaacagtt
ccagttactggcaaggacggtggtgatagtgccgaggaatgtttatcggctattagcttc
agcaaaaaaggatccaggtacatttgttctggaggaactggtcaaattgttaagatatgg
gatctgcaaagaaagctttgtattaagaagttgaagggtcatacaagtacaataacgggt
gtcatgtacaactgcaaagatgagcatttggcttctgttagtgttggtggggatctaata
gtccacaaccttgcatctggagcaagggctacagaactcaaagatccaaatgggcaggta
ttaaggttgcttgattattcaaggtccagtcgacacctcctactcactgcaggtgatgat
ggcactgtgcatctgtgggacacaactggtcgtagccccaagatgtcctggttgaagcag
cattcggcaccaactgctggcgtttgcttctctccatcaaacgaaaagataattgctagt
gtggggatggacaaaaagctttacacttatgattctggatccagaagatcttcgtcctgc
attgcctatgaggcacctttctcctctttggcgtttggggataatggttatattctggca
gctggaaccagcaatggtagagtagtgttttacgacgtccgtggaaaaccgcagcctgtt
actgtcttgcacgctttcagtaattcagaggatgtaacaagtctttcatggcaaacatca
aaaccagttattgtgaatgagaaaaattacacttctgagatggctcttcttggcagtact
gtggaagattcagttgtcattccggatccacttccctcaacgacaccctcagcttcacag
tccgctttggcaccaggttcccgtggagtttccgcgagtactgtaaatgcatcatcagtt
gaacaaacaccaaatagaactcatctatggcctggtgggccactgggcagactgcatgca
cttcgtgcaagtgacagttttaatgatgatatgggtgttttttcacctattattgacgta
tcatctgttgagaagtgggctgatagtgaaggattcaataataaggaacatttcgttgtt
gacaaaaagccgtcctctttgctatttccttcatccagcaagggatattcgttcggagac
gatggaaacaaggaacatccgatattcgactggaaaccaagttctacttcgaaacaggat
gacacgagggttgctttttcgtcttttggatctactacgccaacagcatcatccaaaagt
gaagacactgccttgacacctccagaagcatggggtggcgataaattttctgagaagttt
aaccagttggccaatgagaaattttctgataaatttagccacctgcatgcaccttcacgt
ctcgcggtttcaagcacatgtgctagtacatctggatcaatgttctctagctctcgagat
ttccccttgtcgcttggtcagacaaacctcgcaaacgctagctcagaattcccacggatc
agagacttctcttcaacctttgagacatcctcaacacagacagacaacaacttgccttca
agcccattgtttacaaaaggcatcacagctccgggtaacattgattcattgaggctatca
ccaaattttactcgtaggttctcaacatatgctgagagaatcagcaccacttcttccttt
agtgacggggcctctctcactctgggtggttcacccaagataaagaaaacaggcgcagaa
acgagagaggaagttttaaatcatctgttgccgagaccagagatggtggctgcaacagaa
gcaggagctatgccgcttatgaatcagggagggttgaagcaacctcaaacggatcaacag
cagatgatgggtagtagcaatttcacgcttcagctatttcaaagaacgctcgaaggaact
ttggattctttccaaaactcaattcatgatgacgtgaggaaccttcacattgagatcctc
agacagttccacatgcacgagatggagatgtcgaaggtgttaagctcgattctggagaac
caagcggagcaaatgaaggagttaaaattgttgcgaaaagagaatcaagagctcaaagaa
aggctatag

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