Arabidopsis lyrata (lyrate rockcress): 9309441
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Entry
9309441 CDS
T01578
Name
(RefSeq) transcription elongation factor SPT4 homolog 1
KO
K15171
transcription elongation factor SPT4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
9309441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9309441
03019 Messenger RNA biogenesis [BR:
aly03019
]
9309441
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
9309441
RNA polymerase I system
9309441
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
9309441
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
PylS_N
Motif
Other DBs
NCBI-GeneID:
9309441
NCBI-ProteinID:
XP_002871347
UniProt:
D7M1F7
LinkDB
All DBs
Position
Unknown
AA seq
116 aa
AA seq
DB search
MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKMEDEHERIVDVTTPNFN
GIISMMDPRKSWAARWLRIGKFAPGCYTLAVSEALPEEMQSICQQVRVQYVPPKRI
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagcgcctgctcagattccgacgagtttcggccacgagcttagggcttgtctt
cgatgccgcctcgtcaagacctacgatcagtttagggactctggttgcgagaactgtcct
ttcttcaaaatggaagacgaacatgaacgtatcgtcgatgttacaacccctaatttcaat
ggtataatctctatgatggatccacgcaaaagttgggcagcaagatggttaagaattggg
aagtttgctcctggttgctacactcttgctgtctcagaggcactcccagaagaaatgcag
tccatatgccaacaagtacgggtgcagtacgttccgcccaaacgcatttga
DBGET
integrated database retrieval system
