KEGG   Arabidopsis lyrata (lyrate rockcress): 9309459
Entry
9309459           CDS       T01578                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2
  KO
K12195  charged multivesicular body protein 6
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03250  Viral life cycle - HIV-1
aly04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    9309459
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    9309459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9309459
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aly04147]
    9309459
Membrane trafficking [BR:aly04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    9309459
Exosome [BR:aly04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   9309459
  Exosomal proteins of other body fluids (saliva and urine)
   9309459
SSDB
Motif
Pfam: Snf7 TINF2_N HAUS5 CesT_Tir_1 IL34 DUF7750 DUF1269 Rota_NSP4 FUSC
Other DBs
NCBI-GeneID: 9309459
NCBI-ProteinID: XP_002871364
UniProt: D7M220
LinkDB
Position
Unknown
AA seq 217 aa
MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL
ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNSAIKAIQSEVNLDD
VQKLMDDTAEAKAYQDELSAILGDKLSAEDEEDILAEFDNLESQLIVEDMPEVPTTELVP
EEPEKMDLPDVPTKAPVASNAEITPTKRKVLEEPLEA
NT seq 654 nt   +upstreamnt  +downstreamnt
atggggaatttgttcgtgaagaaaccgaagatcacggaggttgatcgagcgattctttct
ctcaaaacccaaaggcgcaagcttggtcaatatcagcaacagcttgagaaagtaattgaa
gcagaaaagcaagctgcaagagacttaatccgtgagaagcgaaaggacagggctttgttg
gcattgaagaagaagcggacacaagaagagttgttgaagcaagtagatcagtggctcatc
aatgtcgaacaacaattggcagatatcgaacttacaagcaagcagaaagcagtctttgag
agcttaaagcaaggtaacagtgcaattaaggcgattcagagtgaggtcaaccttgatgat
gttcagaaactaatggatgacactgctgaggccaaggcttatcaggatgaactgagtgcc
atattaggtgataaactatcagcagaagatgaagaagatatcttagcagaattcgacaac
ctagaaagtcagctgattgttgaagatatgcctgaagtgcctacgacagagcttgtgcct
gaagaacccgagaaaatggatctccctgatgtgccaacaaaagcaccagtcgcttccaat
gcagaaatcactccaacaaagagaaaagttcttgaagaacctttggaagcttga

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